Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 8e-23
seq1 120 3e-22
seq9 82.4 7e-11
>seq2
Length=3419278
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| |||||||| ||||| ||||||||||| | ||| || |||
Sbjct 1617092 CCACCTCTTAATCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGAT 1617151
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || | || || || ||||||||||||| || ||||| || ||
Sbjct 1617152 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGG 1617211
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| || || | || |||| ||| ||| | | | |||||| | |||||
Sbjct 1617212 ATACCTTCCTTATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACC 1617271
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | |||||||| || ||||| | ||||| || || || |||||
Sbjct 1617272 TCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 1617318
>seq1
Length=3681944
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| || || |||||||| || ||||||||||| | ||| || ||
Sbjct 1219112 CCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAG-- 1219169
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
||| ||| | ||| |||| || || || |||||||||||||||| ||||| || |
Sbjct 1219170 ATAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTG 1219229
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||||||||| ||||| | || || | |||||| | | | ||||| | | ||||
Sbjct 1219230 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGA 1219289
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | |||||||| || ||||| | ||||| || || || |||||
Sbjct 1219290 CCTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 1219338
>seq9
Length=470967
Score = 82.4 bits (90), Expect = 7e-11
Identities = 108/150 (72%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 94862 TGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATT 94921
||||| || |||||||||||||||| ||||| || ||||||||||| || || | |||
Sbjct 292364 TGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGGATT 292423
Query 94922 TTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCA 94981
|| | ||| || | | ||| || | || || || | |||||||| || |||
Sbjct 292424 TTCGACTTCACATTATCAATAGTATCGGAAGATTCAACCTCTAAGGTGATGGTCTTACCA 292483
Query 94982 GTAAGAGTTTTCACAAAGATCTGCATGCTT 95011
|| | |||||| || || || |||||| ||
Sbjct 292484 GTTAAAGTTTTAACGAAAATTTGCATGTTT 292513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291020683520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |