Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq5 214 2e-50
>seq5
Length=1013952
Score = 214 bits (236), Expect = 2e-50
Identities = 583/885 (66%), Gaps = 20/885 (2%)
Strand=Plus/Minus
Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259
||||| ||||| || || || ||||| || | || || ||| ||||||||| || |||
Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933
Query 21260 GGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACA 21319
|| || | | || | || || ||||| | | ||||||||||||| || |||
Sbjct 647932 GGGTTGTTAACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAACA 647873
Query 21320 AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACA-GGAAGAGC 21378
|| || | ||||| ||||| ||||| |||||||| | ||| ||| || | ||
Sbjct 647872 AACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGC-ACATGGTAAGGC 647814
Query 21379 TTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGA 21438
| || || | ||||| || || |||||| ||| || || | | |
Sbjct 647813 ATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTC 647754
Query 21439 TGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACC 21498
| | | || | | | || || | ||||| ||||||||| || |||||
Sbjct 647753 TTCATTTGGAGTGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACC 647694
Query 21499 TTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTT 21558
|||||| |||| || ||||||||||| || ||||| || ||||||| |||||||||||
Sbjct 647693 TTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTT 647634
Query 21559 TAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGC 21618
|||||||| || || ||||||| || || ||||| || || || || |||||||| ||
Sbjct 647633 CAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGC 647574
Query 21619 AACTAATCGTTCACCGTAT---GTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTT 21675
|||||||| ||| || || | ||| || | | |||||| | ||||| |
Sbjct 647573 AACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTC---ATCCATCTCATGGCCCAGTC 647517
Query 21676 TGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtttttttCAT 21734
|||||||| || || ||| ||| || |||||||| || || |||| | | || |
Sbjct 647516 AGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAG-TCAGCCTCCT 647458
Query 21735 CTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA-TACATTTCAGAATGTATATTTTCT 21793
| ||| ||| | | || ||||||| || || |||||
Sbjct 647457 TTGGATC-CTTAACATAGGTGTCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCC 647399
Query 21794 ATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCTCGGAATAAAAT 21853
||| ||||| || ||||| ||||| | || |||| | ||| || |||| | ||||
Sbjct 647398 ATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAG 647339
Query 21854 CGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTT 21913
|| | ||||||| || || || || || || ||| ||||| || || || | ||
Sbjct 647338 TTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTT 647279
Query 21914 TTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTAATAA--ATCTTTTG 21968
|| ||| ||| |||| | || ||||| || ||||| || || | ||| ||||
Sbjct 647278 GAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTC--ATGAGTATCCTTTG 647221
Query 21969 ATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGA 22028
||||||| | |||||| | ||||| || ||| |||||| || ||||| |||||
Sbjct 647220 ATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGA 647161
Query 22029 TATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGATT 22073
| |||| ||| | ||||| || | ||||| || || |||| ||
Sbjct 647160 TTTCATGGTATTTAATTGGGAACAAAACAAATCT-TTTTTTGTTT 647117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900587239680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |