Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq5 214 2e-50 >seq5 Length=1013952 Score = 214 bits (236), Expect = 2e-50 Identities = 583/885 (66%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259 ||||| ||||| || || || ||||| || | || || ||| ||||||||| || ||| Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933 Query 21260 GGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACA 21319 || || | | || | || || ||||| | | ||||||||||||| || ||| Sbjct 647932 GGGTTGTTAACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAACA 647873 Query 21320 AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACA-GGAAGAGC 21378 || || | ||||| ||||| ||||| |||||||| | ||| ||| || | || Sbjct 647872 AACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGC-ACATGGTAAGGC 647814 Query 21379 TTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGA 21438 | || || | ||||| || || |||||| ||| || || | | | Sbjct 647813 ATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTC 647754 Query 21439 TGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACC 21498 | | | || | | | || || | ||||| ||||||||| || ||||| Sbjct 647753 TTCATTTGGAGTGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACC 647694 Query 21499 TTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTT 21558 |||||| |||| || ||||||||||| || ||||| || ||||||| ||||||||||| Sbjct 647693 TTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTT 647634 Query 21559 TAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGC 21618 |||||||| || || ||||||| || || ||||| || || || || |||||||| || Sbjct 647633 CAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGC 647574 Query 21619 AACTAATCGTTCACCGTAT---GTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTT 21675 |||||||| ||| || || | ||| || | | |||||| | ||||| | Sbjct 647573 AACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTC---ATCCATCTCATGGCCCAGTC 647517 Query 21676 TGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtttttttCAT 21734 |||||||| || || ||| ||| || |||||||| || || |||| | | || | Sbjct 647516 AGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAG-TCAGCCTCCT 647458 Query 21735 CTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA-TACATTTCAGAATGTATATTTTCT 21793 | ||| ||| | | || ||||||| || || ||||| Sbjct 647457 TTGGATC-CTTAACATAGGTGTCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCC 647399 Query 21794 ATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCTCGGAATAAAAT 21853 ||| ||||| || ||||| ||||| | || |||| | ||| || |||| | |||| Sbjct 647398 ATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAG 647339 Query 21854 CGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTT 21913 || | ||||||| || || || || || || ||| ||||| || || || | || Sbjct 647338 TTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTT 647279 Query 21914 TTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTAATAA--ATCTTTTG 21968 || ||| ||| |||| | || ||||| || ||||| || || | ||| |||| Sbjct 647278 GAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTC--ATGAGTATCCTTTG 647221 Query 21969 ATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGA 22028 ||||||| | |||||| | ||||| || ||| |||||| || ||||| ||||| Sbjct 647220 ATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGA 647161 Query 22029 TATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGATT 22073 | |||| ||| | ||||| || | ||||| || || |||| || Sbjct 647160 TTTCATGGTATTTAATTGGGAACAAAACAAATCT-TTTTTTGTTT 647117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900587239680