Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5 421 8e-113 seq1 95.1 2e-14 >seq5 Length=1013952 Score = 421 bits (466), Expect = 8e-113 Identities = 1447/2223 (65%), Gaps = 83/2223 (4%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| | ||| || || | || || | || |||||||| || || || | | Sbjct 376721 GTGAATTGAATAGCAGCAGAAGCAGCTTGTGTTCTTAAGTAGTACATACCAGTCTTCAAA 376780 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 62113 || |||| ||||| || ||||| ||||| || ||| | || ||| || Sbjct 376781 CCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTACCCATAGTTGGGTTCTT-TAA 376839 Query 62114 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62173 || || ||||| |||||| |||||| ||| | || || || || |||||||| | || Sbjct 376840 GTGAATGTTCATTGATTGAGATTGATCAATGTAAGCACCTCTATCAGCAGCCATATCAAT 376899 Query 62174 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62233 || ||||||||| ||||||||| | || || || | | ||| | || ||||||| Sbjct 376900 AATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTATAATTTCTTTAATTCGTCTGGAAT 376959 Query 62234 GTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62290 ||| | || || ||||| || ||| |||| || || |||||| || |||| | Sbjct 376960 GTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATGATGAAATTCTTCATAGCATCGCT 377019 Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350 ||||| | || |||| |||| || | || || || || | ||| ||||| || Sbjct 377020 CCATAGACCTAAATCAACTAAATCTCTTAGCAAATATGGGTTGACAATTTGGAATTCACC 377079 Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410 | | ||||| | | |||||| ||| || || ||||| | |||| || | || Sbjct 377080 TGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAGCACTCGTTGTAACC 377139 Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470 ||||||||| | |||||| ||||| ||||| || |||| ||||||| ||||| | ||| Sbjct 377140 CAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAAGAGTTTCTCAAACC 377199 Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TACAACN 62528 || | ||| | || |||| | ||||||| ||| | ||| | || | || Sbjct 377200 GTGCTTGGAAATTCTTTCCTTTAATAGATCCCAATCCCATAAATCAGTTGGCTTCTTACC 377259 Query 62529 NNNNNNNNNNNNNNTTGTAGAATACCGTTA----CTGGCGTACGATCCTACATATGTATC 62584 ||||| | ||| | | |||| | || | | | || | || Sbjct 377260 CCATAAGTCGAA--TTGTAATAGACCTTGAGAAGCTGGAGAAC---CTTGGAAAT-TCTC 377313 Query 62585 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTC-------GCCTCTAATGCACCGTAAT 62637 ||||| || || | || | | |||| || || ||||| ||| | | | Sbjct 377314 ATATGGCCCATC----TAAGATTG---ACAATTCAATCGAAGCTTCTAAAGCAGCATGGT 377366 Query 62638 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 62697 | |||||||| || || | | || | || || || || ||||||||| |||| Sbjct 377367 ACATGGTTTCAAAAATTTGAATGTTCAAGTCCCTGGCCTCTGGGGAATCAAATGG-TAAT 377425 Query 62698 TT-AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62756 | || | || || |||| || || ||||||||||||| | | || ||||| | | || Sbjct 377426 CTCAATTGCATGAAAACGTCAGCCAAACCTTGAACACCAACAGCAATTGGTCTGTTTTTC 377485 Query 62757 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62816 | ||||| || ||| ||| || ||| ||||| || | || || || | || | | Sbjct 377486 ATGTTAGATGTTCTAGCCTCTTCAACAGGGTAATAGTTTCTGTCAATGATCATGTTCA-A 377544 Query 62817 TTTCTGA-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCG------CCC 62869 |||| | ||| || || || || | |||||| ||| | | | | | | Sbjct 377545 GTTCTTAGCAACAACCTTAGTAACTTCATGCAGTTTTTCAAAGTTATACCATGATGACTC 377604 Query 62870 ---ATCT-ATT--ACAAA--CATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACC 62921 ||| ||| || || || | ||| || || || || || ||||| ||||| || Sbjct 377605 TGAATCCGATTCGACGAATGCAGG--CAAAGCCACGGAAGCTAGGTTACAGACGGCAACT 377662 Query 62922 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCT 62981 || | | | ||||| | || ||| ||| | ||| |||| ||||| || Sbjct 377663 TCTTCTGGTGAGGAATATTCAACAATTTCACAGCACAAGTTAGATGACTTAATAGTACCC 377722 Query 62982 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 63041 || || | ||| || |||| ||||| |||||||| || | || |||||||| || Sbjct 377723 AAGTTCTTTTGGTTGGATTTTTCATTACAAGCATCCTTGTATAACATAAATGGAGTGCCT 377782 Query 63042 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATT-T 63100 ||||| | || | ||||| ||| || | ||| | | ||||||| | || || | Sbjct 377783 GTTTCCGTTTGTGCTTCTAAAATAGCATACCATAGCTTTTGAGCCTTGAC---AGTTTGT 377839 Query 63101 GTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63158 || ||| | |||| ||| ||| ||||| || ||| || || || || ||| Sbjct 377840 CTACCTCTGCCTTCTTCTTCATATTTGGTATATAAAGCTTCAAATTCATCACCGTAAAGT 377899 Query 63159 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63218 | || || ||||| ||| || | | || | ||| | | | | || ||| Sbjct 377900 TCGTGTAAACCAGGGGCTTCGGAAGGGGAGAATAAAGTCCATTGAGCATTCTGCTCAACT 377959 Query 63219 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 63278 | |||||||| | ||| |||||||| | || ||||||||||| | ||| || Sbjct 377960 CTCTTCATAAACAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATCTCT 378019 Query 63279 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 63338 || || || ||||||| ||| ||||| ||| | | |||||||||||||| ||||| Sbjct 378020 TCCTTACCGTGATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGTTCA 378079 Query 63339 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63398 | ||||| || | | | || || | |||||| || ||||| || | ||||| || ||| Sbjct 378080 ATGTATAAAGCGAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCAGTG 378139 Query 63399 TTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATA 63458 || || ||||||| | ||||||||| |||||||| || ||||||| ||||||| ||| Sbjct 378140 TTGTTGAAAACTCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCAATA 378199 Query 63459 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63518 || ||| | | | ||| ||| ||| || ||| || || || || | || || Sbjct 378200 TATGAACCAGTAGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTGGAA 378259 Query 63519 ATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTA 63578 || || || ||| | || || || ||||| ||||| || || ||| || |||| | Sbjct 378260 ATCAAAGCACATTGCTTCAAAGTATCATAAATACCATCGATAGAATCGTCTTTCATAGCA 378319 Query 63579 AGTAGAAAACAGCTAGACATTTG---GTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 63635 | || ||| || ||||||||| |||| | ||| || ||||||||||| || || Sbjct 378320 ACTAAAAAGCATGAAGACATTTGTGCGTGAGG---AGTACCAGCATTAAATAATGTTGGT 378376 Query 63636 GAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAAT-AGCTGAGTCTA 63693 |||||||| ||||| || |||| || | |||| || || || || || | || || | | Sbjct 378377 GAAGCGTGAGTAAAGTATCTTTCTGACATGTAG-TTATAAGTTTCTATGACCTTAG-CAA 378434 Query 63694 TA-TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACG 63752 || | || | || || || | | || | ||| | | |||||| ||||||||| | Sbjct 378435 TATTATCACCG-TGGATACCAATAGAAACTCTCATAACTAAGTGCTGTGGTCTTTCAGCA 378493 Query 63753 ATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 63812 | ||| ||| |||| || || ||| | |||||||| |||||||| ||||||||| Sbjct 378494 ACAGCACCGTTAATTCTCAATAAATATGATCTCTCCAAAGTCTTAAAACCGAAATAGTTG 378553 Query 63813 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 63872 || || || || || ||||||| |||| | || || | || ||| ||| || | ||| Sbjct 378554 TAGGAGAAATCACGGTCGTAAACAATAGCAGAATTCAATTCATCACTATGCTTTTGAACG 378613 Query 63873 ATATCCATGGTGA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAAC 63928 || || || | | ||| || || || |||| | | ||||| || || || | Sbjct 378614 ATGTC----GTAAACTTCCTTAGAGATCATTGGAGCCGGCTGACCATTCTTTGGGTTGAT 378669 Query 63929 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT 63988 ||| | |||| | || || ||| | |||| |||| |||| | |||||||| || Sbjct 378670 ATAAGTATATAATTGTTCAATAACTGAAGAAAATTGTTTGGTTGTCTGCTTGTGTAAGTT 378729 Query 63989 TGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG-TTG--TGTAGTACAAGT 64045 || | ||||||||||| |||| |||||||||| || || || ||| || || Sbjct 378730 AGAAATAGCTATTCTGGCAGCTAAGGTGGCATAATCTGGGTGAATGGTTGTCATATAA-- 378787 Query 64046 GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCC 64105 || || |||| || |||| | |||||||| | || || || || ||||| | || Sbjct 378788 -GCAGCAGTTTCAGCAGCCAAGTTATCCAATTCGATAGTGGTAACACCGTTATAAACACC 378846 Query 64106 TTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACA 64165 |||||| | || ||| || || ||| | ||| | | || ||| || ||||| Sbjct 378847 AGAAATAACACGCTGAGTAATTGCAACAGCATCCACATGTTTTGGGTCTAAACCGTAACA 378906 Query 64166 TAA 64168 ||| Sbjct 378907 TAA 378909 Score = 257 bits (284), Expect = 2e-63 Identities = 616/915 (67%), Gaps = 25/915 (3%) Strand=Plus/Minus Query 32992 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33051 ||||| | |||||| || |||||||| || ||| | ||||| || || || || Sbjct 648027 TCTTG-GCCATAACACCAGCCTTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTC 647969 Query 33052 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 33111 || || | || || ||||||||||| || || || || ||| |||| || || || Sbjct 647968 TTACCAGCTAAAGAAATATTTTCCATAAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTC 647909 Query 33112 ttAAATCCCAATTCAGA-AATCA--ATCTATCCGCGACGAATTCTATATATGTTTTCATC 33168 || | || || ||| ||| | ||||||| || || || || | ||| |||| Sbjct 647908 TTGCAACCTAA---AGATAATAATAATCTATCAGCAACAAACTCAACGTATTGGCACATC 647852 Query 33169 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTC 33227 | ||| ||||| || | | | | ||| | || | || ||| | |||| ||| Sbjct 647851 AATTCTGCGTTCATACCCAATAATGCACATGGTAAGGCATCCGTGAAGTATCTCTT-TTC 647793 Query 33228 AATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAA 33287 |||| || || || || ||||| ||| |||||||| | || | || | Sbjct 647792 AATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTCTTCATTTGGAG--TGTTGTTC 647735 Query 33288 ATGTTTAAACATCA--AACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 33345 |||| | || | |||| || ||||| ||| | ||| || ||||||| ||| | | Sbjct 647734 ATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAAT 647675 Query 33346 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33405 || || || || || | || ||||||||||| | |||||| | |||||| || ||||| Sbjct 647674 TCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCA 647615 Query 33406 AATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--AT 33463 ||||| ||||| |||||||| ||||| || ||||||||||||| | ||| || | || Sbjct 647614 AATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAAT 647555 Query 33464 AACCGGCGCTGTC-ATGT--ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA 33519 || | | | || ||| ||||| || || ||||| || ||||| | || | ||| Sbjct 647554 AA--GCCATTTTCGTTGTTCATCCATCTCATG-GCCCAGTCAGCCTTTTCCTTGATGCAA 647498 Query 33520 GGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTA 33579 || || || || || ||||| || | ||| || || ||| |||||||| || Sbjct 647497 GGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTG 647438 Query 33580 TCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAG 33639 |||||||| | || |||| || || |||||||| || ||||| || |||||| Sbjct 647437 TCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAG 647378 Query 33640 AAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTC 33699 ||||| | || || | ||| || ||||| | | |||| ||| |||| || || || Sbjct 647377 AAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTA 647318 Query 33700 ACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCT 33759 || || ||||| ||||||||| || || || || | || ||| || ||||| | Sbjct 647317 ACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTT 647258 Query 33760 GGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTC 33816 ||| | || ||||| |||| |||| || |||| ||| | |||||| | ||| Sbjct 647257 TCATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTC 647198 Query 33817 CAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAA 33876 || || || || || ||||| || ||||| | |||||| |||| |||| |||||||| Sbjct 647197 CAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAAC 647138 Query 33877 ATAACAAATCTATTT 33891 | ||||||||| ||| Sbjct 647137 AAAACAAATCTTTTT 647123 >seq1 Length=3681944 Score = 95.1 bits (104), Expect = 2e-14 Identities = 319/487 (66%), Gaps = 11/487 (2%) Strand=Plus/Plus Query 62030 TAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAG 62089 || |||||| || || |||||||| || |||| | ||||| |||||||| || || Sbjct 1059276 TAAATAGTAAATACCAGTTTTTAGTCCTTTCTTCCAAGCATAAAAGTGCATACTTGTAAG 1059335 Query 62090 TTTGGAATAACTCGGATCTGCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAG 62147 || || | || || || ||| ||| || | |||||| ||||| ||||| Sbjct 1059336 CTTCGACATTGTTGGTTCC-CTC-ATGAATAAGTTTAATGATTGAGAATGATCAATGAAT 1059393 Query 62148 GCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTA 62207 | | | | ||| || | ||| | || | |||||| ||||||||||||| |||||| Sbjct 1059394 GGTGCACGGTCAGCTGACATATCAATTAAATGCTTTTGAGGAATTTCCCAAACTGTTTTA 1059453 Query 62208 TAAACTCGCTTAATATCTTCTGGAAGGTTTGTATTC---TGAATGGATCCACCATCTGC- 62263 || | ||||||||| | ||| | | || || ||||| || || | ||| Sbjct 1059454 TACAAAGACTTAATATCATTTGGTATTTCATTAATCAATTGAATTGACCCGTTGT-TGCT 1059512 Query 62264 CATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAAC-TCTAAGGA 62322 || ||| ||||||||| | |||||||||| || ||| ||||| | ||| | | Sbjct 1059513 TATTATCTGATTCTTGATATTCTCATTCCATAGATTGAGTTCGATTAAATCGTCT-ACCA 1059571 Query 62323 GATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGG 62382 || |||||| | |||||| || || || || ||||| | |||||||||||| | Sbjct 1059572 AATAGCTATTAACGATTTGAAACTCACCGGATAAGACTCTTCTTGTGTAAATATTAGATG 1059631 Query 62383 TATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAG 62442 | || || | | ||| | ||| | || || | ||| || ||||| ||||| Sbjct 1059632 TGATTGGCTCAAAACATTCAGTGAATCCTAGTATCTGTGAAGTCGAGGCAGTAGGCATTA 1059691 Query 62443 GTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCC 62502 || ||||| || ||||| | ||||| | | | ||||| |||| | | |||| Sbjct 1059692 AGGCAACCAACAACGAGTTTCTGACACCGTTCGATTTTATTTTCGCTTTCAATGAATCCC 1059751 Query 62503 AATTCCA 62509 ||| ||| Sbjct 1059752 AATCCCA 1059758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946950821120