Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq5 122 8e-23 seq1 107 2e-18 >seq5 Length=1013952 Score = 122 bits (134), Expect = 8e-23 Identities = 557/871 (64%), Gaps = 43/871 (5%) Strand=Plus/Minus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 ||| ||| ||| | |||||||| || || ||||| || | | ||| || || | ||| Sbjct 648002 GTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCAT 647943 Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCG 119764 ||| ||||| || || | ||| | ||||| | | | || || || || | || Sbjct 647942 AAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCT 647883 Query 119765 ATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGAC 119824 ||| || |||||||| | ||||| |||||| ||| | ||||| ||||| | || Sbjct 647882 ATCAGCAACAAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGCACA 647823 Query 119825 CGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC--TACAAACATACTC 119882 ||||| |||| || ||| | |||||||||||| || ||||| || || | | Sbjct 647822 TGGTAAGGCATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGAC 647763 Query 119883 AACACCTTGGTC--TTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATAGAC 119940 |||| || || |||||| | |||||| | | | || ||| ||| || Sbjct 647762 AACAATTTCTTCATTTGGAGTG-TTGTTCATGT-GAGAGAATA-----------ATAAAC 647716 Query 119941 AAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGC 120000 ||||||| || ||||||| ||||| ||||| |||| | ||| || | |||| |||| Sbjct 647715 AAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGC 647656 Query 120001 CGGG---TAGAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAG 120057 | || ||| ||| |||||| | | |||| | |||||| ||||| Sbjct 647655 CCGGCATTAGGCCTCTCTTTTTC---------AACCAAAAGATAGAAGCAAATGAACCAG 647605 Query 120058 aaaaaaaGACGCCTTCGACGATAGCAAAAGCGACCATGCGTTCGGCGAATGTGGCAGATT 120117 | || |||| |||||||| |||||| || || | | |||||||||| | || || Sbjct 647604 AGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAGCCATTTT 647545 Query 120118 GATTTTCGATCCATTTTTGAGCCCAAGCCGCCTTCTGCTTGACACTATCTATATGCTCGA 120177 || | |||||| | ||||| | ||||| | ||||| | | ||| ||| | Sbjct 647544 CGTTGTTCATCCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAA 647485 Query 120178 TCGCATTCAAAATCCTGTC-GCATTCTTGGGGATCTTTAATGTATTCGACGA-CAAGAAT 120235 | ||||| || | ||| || | ||| ||||| |||| || | ||| ||| ||| Sbjct 647484 TAGCATTGAATAAGAAGTCAGCCTCCTT-TGGATCCTTAACATAGGTGTCGATCAATAAT 647426 Query 120236 GTTATACATTTCCGTGTGAACACACTCAATGAATGTCTGTTGCGCATAGAAAAAACTAGC 120295 | || |||| | ||| | || || | |||| | |||||| | | || Sbjct 647425 G-AGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTGGC 647367 Query 120296 TTC--CAATTCGGGC-ACGGCGGATTGCATGTGCTCGATGATGTTAGTGTTCACGATGAC 120352 ||| |||| || | |||| || | || || | | ||| ||| || || | Sbjct 647366 TTCTGGAATTTGGACTTCGGCAGA---AAAGTTTTCAACCAAGTTCTCGTTAACAATACC 647310 Query 120353 GTCGGCGGCAGCGAAAAACGCGAGAACGTGCTT--AAGAAAAAATCGTTCTTTATCGTTC 120410 ||||| ||| || || || || | ||| ||| || ||||||| ||| | || || Sbjct 647309 GTCGGAGGCTGCAAAGAAAGCTAAAAC--TCTTGAAATGAAAAATCTTTCGCTTTCATTT 647252 Query 120411 AGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGACTTTCCAGTGA 120470 | | | |||||||| || | | ||||| || | || || ||||| | ||||| | Sbjct 647251 AATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAAA 647192 Query 120471 CAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 || | | || ||||||||| |||||||| Sbjct 647191 GAAGCTTCAGCCTTCTTGTACATTTGCCAGA 647161 >seq1 Length=3681944 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26767 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAA 26826 |||||||| | || || ||||| |||||||| || | ||||| | || | ||||| Sbjct 1219340 AAATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCT 1219281 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 |||||||| || | ||||| ||||| ||||| ||||| || || || |||| Sbjct 1219280 CAGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATC 1219221 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 |||||||| | || | | || || ||| | ||||||| ||||| | | ||||| | Sbjct 1219220 AACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTACA 1219161 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||| ||||| || | || | ||| | ||| | ||||| || Sbjct 1219160 ACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 1219112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662208535040