Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 192 2e-43
seq1 91.5 4e-13
>seq5
Length=1013952
Score = 192 bits (212), Expect = 2e-43
Identities = 503/752 (67%), Gaps = 28/752 (4%)
Strand=Plus/Plus
Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273
|| |||| |||||||| || | |||||||| ||| ||||| | || || |||
Sbjct 647284 TTTTAGCTTTCTTTGCAGCCTCCGACGGTATTGTTAACGAGAACTTGGTTGAAAACTTTT 647343
Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333
| | ||| | ||| ||||| |||| |||||||| ||| | || || ||||| ||||
Sbjct 647344 CTGCCGAAGTCCAAATTCCAGAAGCCAAGTGTTTCTACGGTTTCCAGATCATGATGGAAA 647403
Query 22334 ATGTTCACGCGGAAACATATTC--TAT-GATGCTACAGTCACTCGTAGAAGAT--AAAGA 22388
| | ||| | ||||| || || ||| ||| | ||| | || | ||| ||||
Sbjct 647404 ACATCCACTCTGAAACTTACTCATTATTGAT-CGACACCTAT--GTTAAGGATCCAAAGG 647460
Query 22389 CGAACAACGAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGA 22448
| || ||||||| || ||| || |||| | || ||| | ||||| ||
Sbjct 647461 AGGCTGACTT--CTTATTCAATGCTATTGAGACTATTCCTTGCATCAAGGAAAAGGCTGA 647518
Query 22449 TTGGGCGCTGAAATGGATGAACAATGAA---CGTTCATTCGCGGAACGTCTTATTGCATT 22505
||||| ||| |||||||||||| ||| | | |||||| ||| | | |||| ||
Sbjct 647519 CTGGGCCATGAGATGGATGAACAACGAAAATGGCTTATTCGCCGAAAGATTAGTTGCCTT 647578
Query 22506 TGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaa 22565
||||| || ||||| || ||||| ||||| ||||| | | ||||||||| | |||||
Sbjct 647579 TGCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCATTTGCTTCTATCTTTTGGTTGAAAAA 647638
Query 22566 aCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCT 22625
| | | |||||||| |||| || || ||||| || ||| | ||||||| ||| |
Sbjct 647639 GAGAGGCCTAATGCCGGGCTTAACTTTCTCTAATGAATTGATTTGTAGAGATGAAGGTTT 647698
Query 22626 TCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATAT-- 22683
|| || |||||||| ||| | ||| || || | ||| | || |||| ||
Sbjct 647699 ACACACTGATTTTGCTTGTTTATTAT-TC----TC-TCACATGAACAACACTCCAAATGA 647752
Query 22684 -GAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGA 22742
|||| ||| | | |||||||| | |||||||| ||||| || | ||
Sbjct 647753 AGAAATTGTTGTCAAGATTATTACTGAAGCAGTTGACATTGAAAAGAGATACTTCACGGA 647812
Query 22743 GGCGTTACCAGTAAGTCTCATT-GGTATCAATGCCGAATCAATGAGTACATATATTAAAT 22801
|| |||||| | | | ||| ||||| || || |||| ||| | ||| || | |
Sbjct 647813 TGCCTTACCA-TGTGCATTATTGGGTATGAACGCAGAATTGATGTGCCAATACGTTGAGT 647871
Query 22802 TTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCA--AAGCATTATAACGTCGTTAA 22859
||||||| ||| | ||||| | || | ||| |||| ||||| || || || ||
Sbjct 647872 TTGTTGCTGATAGATTATTATTATCTTTAGGT--TGCAAGAAGCACTACAAGGTTAACAA 647929
Query 22860 TCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAG 22919
||||| || | |||||| |||||| | | || |||||||| ||||| ||||| ||
Sbjct 647930 CCCATTCGACTTTATGGAAAATATTTCTTTAGCTGGTAAGACCAACTTCTTTGAAAAGAG 647989
Query 22920 AGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951
||| || |||||||| || ||||||||||
Sbjct 647990 AGTGTCCGACTACCAAAAGGCTGGTGTTATGG 648021
>seq1
Length=3681944
Score = 91.5 bits (100), Expect = 4e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 111363 GAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTA 111422
||||| || |||||| | | || ||||| |||| || |||| | | ||| ||
Sbjct 404629 GAACTGCTCTGGTTTGTCCAAGGGTGTACAGATGCTAAGAAACTAACCGAAAAGGGCGTC 404570
Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC 111482
|| || ||||| || || ||||| | || | | |||||||| ||||||| || |
Sbjct 404569 AAGATCTGGGAAGGTAACGGATCTAGAGAATATTTAGATTCACTTGGTCTAACAGATAGG 404510
Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTAC 111542
||||||||| || || ||||| || || || |||||| | || |||||||||||||||
Sbjct 404509 AGAGAAGGTGACCTTGGCCCAGTGTATGGTTTCCAATGGAGACATTTTGGTGCAGACTAC 404450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353065625024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |