Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 192 2e-43 seq1 91.5 4e-13 >seq5 Length=1013952 Score = 192 bits (212), Expect = 2e-43 Identities = 503/752 (67%), Gaps = 28/752 (4%) Strand=Plus/Plus Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273 || |||| |||||||| || | |||||||| ||| ||||| | || || ||| Sbjct 647284 TTTTAGCTTTCTTTGCAGCCTCCGACGGTATTGTTAACGAGAACTTGGTTGAAAACTTTT 647343 Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333 | | ||| | ||| ||||| |||| |||||||| ||| | || || ||||| |||| Sbjct 647344 CTGCCGAAGTCCAAATTCCAGAAGCCAAGTGTTTCTACGGTTTCCAGATCATGATGGAAA 647403 Query 22334 ATGTTCACGCGGAAACATATTC--TAT-GATGCTACAGTCACTCGTAGAAGAT--AAAGA 22388 | | ||| | ||||| || || ||| ||| | ||| | || | ||| |||| Sbjct 647404 ACATCCACTCTGAAACTTACTCATTATTGAT-CGACACCTAT--GTTAAGGATCCAAAGG 647460 Query 22389 CGAACAACGAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGA 22448 | || ||||||| || ||| || |||| | || ||| | ||||| || Sbjct 647461 AGGCTGACTT--CTTATTCAATGCTATTGAGACTATTCCTTGCATCAAGGAAAAGGCTGA 647518 Query 22449 TTGGGCGCTGAAATGGATGAACAATGAA---CGTTCATTCGCGGAACGTCTTATTGCATT 22505 ||||| ||| |||||||||||| ||| | | |||||| ||| | | |||| || Sbjct 647519 CTGGGCCATGAGATGGATGAACAACGAAAATGGCTTATTCGCCGAAAGATTAGTTGCCTT 647578 Query 22506 TGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaa 22565 ||||| || ||||| || ||||| ||||| ||||| | | ||||||||| | ||||| Sbjct 647579 TGCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCATTTGCTTCTATCTTTTGGTTGAAAAA 647638 Query 22566 aCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCT 22625 | | | |||||||| |||| || || ||||| || ||| | ||||||| ||| | Sbjct 647639 GAGAGGCCTAATGCCGGGCTTAACTTTCTCTAATGAATTGATTTGTAGAGATGAAGGTTT 647698 Query 22626 TCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATAT-- 22683 || || |||||||| ||| | ||| || || | ||| | || |||| || Sbjct 647699 ACACACTGATTTTGCTTGTTTATTAT-TC----TC-TCACATGAACAACACTCCAAATGA 647752 Query 22684 -GAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGA 22742 |||| ||| | | |||||||| | |||||||| ||||| || | || Sbjct 647753 AGAAATTGTTGTCAAGATTATTACTGAAGCAGTTGACATTGAAAAGAGATACTTCACGGA 647812 Query 22743 GGCGTTACCAGTAAGTCTCATT-GGTATCAATGCCGAATCAATGAGTACATATATTAAAT 22801 || |||||| | | | ||| ||||| || || |||| ||| | ||| || | | Sbjct 647813 TGCCTTACCA-TGTGCATTATTGGGTATGAACGCAGAATTGATGTGCCAATACGTTGAGT 647871 Query 22802 TTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCA--AAGCATTATAACGTCGTTAA 22859 ||||||| ||| | ||||| | || | ||| |||| ||||| || || || || Sbjct 647872 TTGTTGCTGATAGATTATTATTATCTTTAGGT--TGCAAGAAGCACTACAAGGTTAACAA 647929 Query 22860 TCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAG 22919 ||||| || | |||||| |||||| | | || |||||||| ||||| ||||| || Sbjct 647930 CCCATTCGACTTTATGGAAAATATTTCTTTAGCTGGTAAGACCAACTTCTTTGAAAAGAG 647989 Query 22920 AGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951 ||| || |||||||| || |||||||||| Sbjct 647990 AGTGTCCGACTACCAAAAGGCTGGTGTTATGG 648021 >seq1 Length=3681944 Score = 91.5 bits (100), Expect = 4e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 111363 GAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTA 111422 ||||| || |||||| | | || ||||| |||| || |||| | | ||| || Sbjct 404629 GAACTGCTCTGGTTTGTCCAAGGGTGTACAGATGCTAAGAAACTAACCGAAAAGGGCGTC 404570 Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC 111482 || || ||||| || || ||||| | || | | |||||||| ||||||| || | Sbjct 404569 AAGATCTGGGAAGGTAACGGATCTAGAGAATATTTAGATTCACTTGGTCTAACAGATAGG 404510 Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTAC 111542 ||||||||| || || ||||| || || || |||||| | || ||||||||||||||| Sbjct 404509 AGAGAAGGTGACCTTGGCCCAGTGTATGGTTTCCAATGGAGACATTTTGGTGCAGACTAC 404450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353065625024