Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq11 140 2e-28
seq9 102 5e-17
seq1 91.5 1e-13
>seq11
Length=350281
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 165 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 224
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 225 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 259
>seq9
Length=470967
Score = 102 bits (112), Expect = 5e-17
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 38161 CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTT 38220
|||| ||||||||||| || ||||| |||| | ||||||||| | || | ||||| |
Sbjct 292353 CGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCT 292412
Query 38221 TGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAA 38280
| || ||||| ||||||||| | | |||||| | |||||| ||||| || |
Sbjct 292413 TATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCAACCTCTAAGGTGA 292472
Query 38281 TAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
| || ||||| || || ||||| ||||| || |||||||||
Sbjct 292473 TGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCATGTTT 292513
>seq1
Length=3681944
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
||||||||| || | || || || || | ||| ||||||||||| ||||| |||||
Sbjct 1219111 ACCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGA 1219170
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| | | || || ||||| || || ||||| |||| | ||||||||| | ||
Sbjct 1219171 TAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 1219230
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| ||||| || || ||| ||||| | | || ||| ||| ||
Sbjct 1219231 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGAC 1219290
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| || || || ||||| || |||||||| ||||| || |||||
Sbjct 1219291 CTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 1219338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947069370592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |