Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 9e-22
seq1 116 3e-21
seq9 95.1 1e-14
>seq2
Length=3419278
Score = 118 bits (130), Expect = 9e-22
Identities = 168/235 (71%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || || || ||||| ||||||| | || || || || ||
Sbjct 1617318 ATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCATCC 1617259
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || | ||| ||| ||| || || ||||| || |||||||| |||
Sbjct 1617258 GACACTATTGACAACGTTAAGTCAAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 1617199
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| | | || ||||| || || ||||||||||||| | | ||| | ||| |||||
Sbjct 1617198 CAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 1617139
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATT 25233
|| ||||| ||||| || |||| || || | || ||||||| || ||||||
Sbjct 1617138 ATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATTAAGAGGTGG-TATTATT 1617085
>seq1
Length=3681944
Score = 116 bits (128), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || || || || || ||||| ||||||| | || || || || ||
Sbjct 1219339 AATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCTC 1219280
Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || ||| || ||| ||||| ||||| |||||||||||
Sbjct 1219279 AGACACCATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAT 1219222
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | || ||||| || || ||||| ||||||| | | || | || |||
Sbjct 1219221 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTAC 1219162
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||| |||||||| | || ||||| |||| ||||||| ||
Sbjct 1219161 AACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 1219112
>seq9
Length=470967
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || ||||| || ||||| ||||||| | || || || || ||
Sbjct 292509 ATGCAAATTTTCGTTAAAACTTTAACTGGTAAGACCATCACCTTAGAGGTTGAATCTTCC 292450
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| ||||| || ||||| |||||| || || ||||| ||||||||||| |||
Sbjct 292449 GATACTATTGATAATGTGAAGTCGAAAATCCAAGATAAGGAAGGTATTCCACCTGATCAA 292390
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGA 25153
|| | | || ||||| || ||||||||||||||
Sbjct 292389 CAAAGATTAATCTTTGCTGGTAAACAATTAGAAGA 292355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327831002080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |