Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2 118 9e-22 seq1 116 3e-21 seq9 95.1 1e-14 >seq2 Length=3419278 Score = 118 bits (130), Expect = 9e-22 Identities = 168/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || || || ||||| ||||||| | || || || || || Sbjct 1617318 ATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCATCC 1617259 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| ||| ||| || || ||||| || |||||||| ||| Sbjct 1617258 GACACTATTGACAACGTTAAGTCAAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 1617199 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || ||||| || || ||||||||||||| | | ||| | ||| ||||| Sbjct 1617198 CAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 1617139 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATT 25233 || ||||| ||||| || |||| || || | || ||||||| || |||||| Sbjct 1617138 ATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATTAAGAGGTGG-TATTATT 1617085 >seq1 Length=3681944 Score = 116 bits (128), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || || || || || ||||| ||||||| | || || || || || Sbjct 1219339 AATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCTC 1219280 Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || ||| || ||| ||||| ||||| ||||||||||| Sbjct 1219279 AGACACCATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAT 1219222 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || || ||||| ||||||| | | || | || ||| Sbjct 1219221 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTAC 1219162 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| |||||||| | || ||||| |||| ||||||| || Sbjct 1219161 AACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 1219112 >seq9 Length=470967 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||||| || ||||| ||||||| | || || || || || Sbjct 292509 ATGCAAATTTTCGTTAAAACTTTAACTGGTAAGACCATCACCTTAGAGGTTGAATCTTCC 292450 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || ||||| || ||||| |||||| || || ||||| ||||||||||| ||| Sbjct 292449 GATACTATTGATAATGTGAAGTCGAAAATCCAAGATAAGGAAGGTATTCCACCTGATCAA 292390 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGA 25153 || | | || ||||| || |||||||||||||| Sbjct 292389 CAAAGATTAATCTTTGCTGGTAAACAATTAGAAGA 292355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327831002080