Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5 248 1e-60 >seq5 Length=1013952 Score = 248 bits (274), Expect = 1e-60 Identities = 629/933 (67%), Gaps = 29/933 (3%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || ||| | ||||||||||| || ||||| || | Sbjct 648020 CATAACACCAGCCTTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 647961 Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907 ||||| || | || | || || ||| || || | || || | ||| | | Sbjct 647960 TAAAGAAATATTTTCCATAAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTCTTGCAACC 647901 Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967 || | |||||||||||||| ||||| || | ||| || ||||||| || || Sbjct 647900 TAAAGATAATAATAATCTATCAGCAACAAACTCAACGTATTGGCACATCAATTCTGCGTT 647841 Query 92968 CATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTACAACG 93025 ||| || | | | | ||| |||| || || || ||| | ||||| || || |||| Sbjct 647840 CATACCCAATA-ATGCACATGGTAAGGCATCCGTGAAGTATCTCTTT-TCAATGTCAACT 647783 Query 93026 GCTTCTTTCAAGATTTCTATTAC----TCTACTATTTGGTGGTTTTTGTACGACATAATT 93081 ||||| | | || | | || ||| | |||||| | | |||| | | | | Sbjct 647782 GCTTCAGTAATAATCTTGACAACAATTTCTTC-ATTTGGAG--TGTTGTTC-ATGTGAGA 647727 Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 | | | ||| || ||||| || || ||||||||||| |||| | ||||| ||||| Sbjct 647726 GAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGA 647667 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||| ||||| || || | || |||| || || | |||||| || |||||||| ||| Sbjct 647666 GAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAATGAACC 647607 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 ||| || || |||||||| || || ||||| || || | | |||||| || | || | Sbjct 647606 AGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAA-TAAGCC-A 647549 Query 93262 ATTAC--TGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319 || | || | |||||| | | ||||| || || |||| ||| || ||||| | || Sbjct 647548 TTTTCGTTGTTCATCCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTC 647489 Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 || ||||| || |||| | | || ||| | | ||| | || || ||||| || Sbjct 647488 TCAATAGCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATCAAT 647429 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 | || || ||||||| |||| || ||||| || ||||| ||||||||||| | Sbjct 647428 AATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTG 647369 Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499 ||||| | || || ||||| |||||| | || || | || || || || ||||| Sbjct 647368 GCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCG 647309 Query 93500 TCGGATGCTGCaaaaaaaGCCAATA--TATGCTTTATAAAATGTTTCTC-ATCATCTTTA 93556 ||||| |||||||| ||||| || | || | ||||| |||| | ||| |||| Sbjct 647308 TCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTTTCA--TTTA 647251 Query 93557 AGC--TTATCCCAATCGGAT-AG-ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | | || | ||| || || || ||| ||||| | ||| | |||||| ||||||| || Sbjct 647250 ATCTGTTGTTCCAGTC--ATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAA 647193 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGAC 93672 || ||||| || || |||||||| | ||| || || || |||| |||||| || | || Sbjct 647192 AGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAAAAC 647133 Query 93673 AAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 ||| | || ||| |||| || ||||||||| Sbjct 647132 AAATCTTTTTTTGTTTTCTTGTAATAACGGCTC 647100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860577255680