Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 1e-32
seq2 134 1e-26
seq9 116 3e-21
>seq1
Length=3681944
Score = 154 bits (170), Expect = 1e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| |||||||| ||||| ||||| || ||||| | || || ||| || |
Sbjct 1219338 ATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCTCA 1219279
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || ||||||||||| ||||||||||| ||||||
Sbjct 1219278 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1219219
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || || || ||| | ||| | || || ||||||
Sbjct 1219218 CAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTACAAC 1219159
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||| ||||||||| | || ||||| || ||||
Sbjct 1219158 ATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATT 1219121
>seq2
Length=3419278
Score = 134 bits (148), Expect = 1e-26
Identities = 172/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| |||||||||||||| |||||||| ||||| ||||| || ||||| | || || |||
Sbjct 1617324 GTCAAGATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAA 1617265
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
| |||| || | ||| | | || ||| || ||||| ||||| ||||| |||||
Sbjct 1617264 TCATCCGACACTATTGACAACGTTAAGTCAAAGATCCAAGATAAGGAAGGTATCCCACCT 1617205
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|||||||| | | || ||||| || || || ||||| ||| | || | |||||
Sbjct 1617204 GATCAACAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGAC 1617145
Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|||||||| ||||| ||||| || |||| || || ||| |||| | || ||| ||
Sbjct 1617144 TACAACATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATTAAGAGGTGGTATT 1617088
>seq9
Length=470967
Score = 116 bits (128), Expect = 3e-21
Identities = 121/159 (76%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||||||||| |||||||||||||| ||||| || |||| | || || ||| |
Sbjct 292513 AAACATGCAAATTTTCGTTAAAACTTTAACTGGTAAGACCATCACCTTAGAGGTTGAATC 292454
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
||||||| | || || | || ||||| ||||| ||||| ||||||||||| ||
Sbjct 292453 TTCCGATACTATTGATAATGTGAAGTCGAAAATCCAAGATAAGGAAGGTATTCCACCTGA 292394
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373
||||||| | | || ||||| || ||||| ||||| ||
Sbjct 292393 TCAACAAAGATTAATCTTTGCTGGTAAACAATTAGAAGA 292355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727836306080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |