Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 154 1e-32 seq2 134 1e-26 seq9 116 3e-21 >seq1 Length=3681944 Score = 154 bits (170), Expect = 1e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| |||||||| ||||| ||||| || ||||| | || || ||| || | Sbjct 1219338 ATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCTCA 1219279 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || ||||||||||| ||||||||||| |||||| Sbjct 1219278 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1219219 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || || || || ||| | ||| | || || |||||| Sbjct 1219218 CAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTACAAC 1219159 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 |||||||| ||||||||| | || ||||| || |||| Sbjct 1219158 ATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATT 1219121 >seq2 Length=3419278 Score = 134 bits (148), Expect = 1e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || |||||||||||||| |||||||| ||||| ||||| || ||||| | || || ||| Sbjct 1617324 GTCAAGATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAA 1617265 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 | |||| || | ||| | | || ||| || ||||| ||||| ||||| ||||| Sbjct 1617264 TCATCCGACACTATTGACAACGTTAAGTCAAAGATCCAAGATAAGGAAGGTATCCCACCT 1617205 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 |||||||| | | || ||||| || || || ||||| ||| | || | ||||| Sbjct 1617204 GATCAACAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGAC 1617145 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 |||||||| ||||| ||||| || |||| || || ||| |||| | || ||| || Sbjct 1617144 TACAACATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATTAAGAGGTGGTATT 1617088 >seq9 Length=470967 Score = 116 bits (128), Expect = 3e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||||||||| |||||||||||||| ||||| || |||| | || || ||| | Sbjct 292513 AAACATGCAAATTTTCGTTAAAACTTTAACTGGTAAGACCATCACCTTAGAGGTTGAATC 292454 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 ||||||| | || || | || ||||| ||||| ||||| ||||||||||| || Sbjct 292453 TTCCGATACTATTGATAATGTGAAGTCGAAAATCCAAGATAAGGAAGGTATTCCACCTGA 292394 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373 ||||||| | | || ||||| || ||||| ||||| || Sbjct 292393 TCAACAAAGATTAATCTTTGCTGGTAAACAATTAGAAGA 292355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727836306080