Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2 163 5e-35
seq1 159 6e-34
seq9 104 4e-17
>seq2
Length=3419278
Score = 163 bits (180), Expect = 5e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||||| || || || ||||||||||| || ||||| | || || |||||
Sbjct 1617106 CAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATC 1617165
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| ||||| || || || || | ||| ||||| || ||||| || |||||||| ||
Sbjct 1617166 TTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGGATACCTTCCTTATC 1617225
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||||| ||| ||| || || ||||| | |||||| || || || ||||||||
Sbjct 1617226 TTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACCTCTAAAGTGATGGT 1617285
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||| || ||||| || |||||
Sbjct 1617286 CTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 1617318
>seq1
Length=3681944
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || ||||| | ||||| || ||||| ||||| || || || | || || ||||||
Sbjct 1219127 AAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCT 1219186
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| || ||||| || || || || | ||||||||| || |||||||| ||||||||||||
Sbjct 1219187 TCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCT 1219246
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| | |||||| || |||||||||| ||||| || || || ||||||||
Sbjct 1219247 TGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGACCTCTAAAGTGATGGTC 1219306
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | ||| || ||||| || ||||||
Sbjct 1219307 TTACCAGTTAAGGTTTTAACGAAAATTTGCATT 1219339
>seq9
Length=470967
Score = 104 bits (114), Expect = 4e-17
Identities = 122/165 (74%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 68297 TGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356
||| || || |||||||| || || || || || || | ||||||||| || ||||||||
Sbjct 292345 TGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAAT 292404
Query 68357 GCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTC 68416
|||||||| ||||| || || | ||| || || || || || | ||||| || ||
Sbjct 292405 ACCTTCCTTATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCAACCTC 292464
Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||||||||| || || || | || || ||||| || |||||
Sbjct 292465 TAAGGTGATGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCAT 292509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622031351040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |