Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq9 109 1e-18 seq2 107 5e-18 >seq9 Length=470967 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 ||||||||||||||||| || || ||||| | | |||||| | ||| || ||||| Sbjct 292352 CCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCC 292411 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 ||||| |||||||||| ||||| || || |||| |||| ||||| || || | ||| Sbjct 292412 TTATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCAACCTCTAAGGTG 292471 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || | ||| || ||||| || ||||| Sbjct 292472 ATGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCAT 292509 >seq2 Length=3419278 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || | || ||||||||||| || || || || Sbjct 1617127 TTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAA 1617186 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | ||||||| | |||||| ||||| ||||| ||||| || | || ||||| Sbjct 1617187 GATTAATCTCTGTTGATCAGGTGGGATACCTTCCTTATCTTGGATCTTTGACTTAACGTT 1617246 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||||| || || | ||||| ||||| || || | || || || Sbjct 1617247 GTCAATAGTGTCGGATGATTCGACCTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAAC 1617306 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 1617307 GAAAATTTGCAT 1617318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653916341696