Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq9 114 9e-21 seq1 111 1e-19 seq2 107 1e-18 >seq9 Length=470967 Score = 114 bits (126), Expect = 9e-21 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 15014 TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTC 15073 |||| |||||||||||||||| ||||| | || || | ||||| || |||||| | Sbjct 292347 TTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATAC 292406 Query 15074 CTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTA 15133 ||||||| || ||||| || ||| | || ||||||||| | ||| || |||| Sbjct 292407 CTTCCTTATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCAACCTCTA 292466 Query 15134 AGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15181 |||| ||||| ||||| || | |||||| || ||||||||||| |||| Sbjct 292467 AGGTGATGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCATGTTTG 292514 Score = 86.0 bits (94), Expect = 4e-12 Identities = 77/95 (81%), Gaps = 4/95 (4%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||| |||||||| ||||| || || | ||| || |||||||| || |||||||| | Sbjct 291659 GCCACCACGCAATCTCAAAACCAAGTGTAAGGTGGACTCTTTTTGGATATTGTAATC--T 291716 Query 15009 GAGAAT--TCTCGCGTCTTCTAATTGTTTGCCAGC 15041 || ||| ||| |||||||||||||||| ||||| Sbjct 291717 GATAATGTTCTACCGTCTTCTAATTGTTTACCAGC 291751 >seq1 Length=3681944 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||||| |||||||| ||||| || | ||| || || ||||| |||||||| || | | Sbjct 1219112 CCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGAT 1219171 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || |||| | ||||| ||||| || ||||| | || || | ||||| || ||| Sbjct 1219172 AAGG-TTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 1219230 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||| ||||||||||| || ||| || ||| | || || || || ||| || Sbjct 1219231 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGAC 1219290 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| ||||| || | ||||| || ||||||||||| Sbjct 1219291 CTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 1219338 >seq2 Length=3419278 Score = 107 bits (118), Expect = 1e-18 Identities = 169/241 (70%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| || || || || | || || || ||||| |||||||| ||| Sbjct 1617092 CCACCTCTTAATCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGAT 1617151 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||||||||| || ||||| | || || | |||||| || ||| Sbjct 1617152 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGG 1617211 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || |||||||| || || || || || | || ||||| ||| ||| || Sbjct 1617212 ATACCTTCCTTATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACC 1617271 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAAT 15189 ||||| || ||||| ||||| || | ||||| || ||||||||||| |||| ||||| Sbjct 1617272 TCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT-CTTGACCTAAAT 1617330 Query 15190 T 15190 | Sbjct 1617331 T 1617331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391860617120