Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 7e-17
seq1 100 3e-16
>seq2
Length=3419278
Score = 102 bits (112), Expect = 7e-17
Identities = 170/241 (71%), Gaps = 5/241 (2%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || | ||||||||||||||||| || || ||| | ||| || |
Sbjct 1617104 CTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCA 1617163
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || || | || |||| || || || || || || ||||| |||
Sbjct 1617164 TCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGGATACCTTCCTTA 1617223
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| | | |||| | | || | || | |||||||| || ||||| || | ||| |
Sbjct 1617224 TCTTGGA-TCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACCTCTAAAGTGAT 1617282
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACC-AATTTAATAATTTA 45363
|| || || |||| ||||| || ||||||||||| | |||| || ||||| || ||
Sbjct 1617283 GGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT--CTTGACCTAAATTAATGATATA 1617340
Query 45364 A 45364
|
Sbjct 1617341 A 1617341
>seq1
Length=3681944
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|| || |||| |||| || ||||||||||| || || || || | |||| || |
Sbjct 1219124 CTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCA 1219183
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | || |||| ||| || || || ||||| ||||| ||
Sbjct 1219184 TCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTG 1219243
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| || || ||||| || | ||| |
Sbjct 1219244 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGACCTCTAAAGTGATG 1219303
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| ||||| || |||||||||||
Sbjct 1219304 GTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 1219338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003019198720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |