Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 102 7e-17 seq1 100 3e-16 >seq2 Length=3419278 Score = 102 bits (112), Expect = 7e-17 Identities = 170/241 (71%), Gaps = 5/241 (2%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || | ||||||||||||||||| || || ||| | ||| || | Sbjct 1617104 CTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCA 1617163 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||| || || || | || |||| || || || || || || ||||| ||| Sbjct 1617164 TCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGGATACCTTCCTTA 1617223 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| | | |||| | | || | || | |||||||| || ||||| || | ||| | Sbjct 1617224 TCTTGGA-TCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACCTCTAAAGTGAT 1617282 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACC-AATTTAATAATTTA 45363 || || || |||| ||||| || ||||||||||| | |||| || ||||| || || Sbjct 1617283 GGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT--CTTGACCTAAATTAATGATATA 1617340 Query 45364 A 45364 | Sbjct 1617341 A 1617341 >seq1 Length=3681944 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || |||| |||| || ||||||||||| || || || || | |||| || | Sbjct 1219124 CTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCA 1219183 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | || |||| ||| || || || ||||| ||||| || Sbjct 1219184 TCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTG 1219243 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | |||||| || || ||||| || | ||| | Sbjct 1219244 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGACCTCTAAAGTGATG 1219303 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| ||||| || ||||||||||| Sbjct 1219304 GTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 1219338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003019198720