Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 181 1e-40 >seq5 Length=1013952 Score = 181 bits (200), Expect = 1e-40 Identities = 1108/1751 (63%), Gaps = 49/1751 (3%) Strand=Plus/Plus Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622 ||||||||| || ||||| | |||| |||||| | || | ||||| || | ||||| Sbjct 376759 GTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTT 376818 Query 115623 GGAGAGTGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG-AAGCG 115679 | ||||| |||| |||| |||||| ||| |||||||| ||| |||| Sbjct 376819 ACCCATAGTTGGGTTCTTTAAGTGAAT--GTTCATTGATTGAGATTGATCAATGTAAGCA 376876 Query 115680 TCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTG 115737 || | ||| || ||||||||||| | ||| | ||| ||||||| || || || Sbjct 376877 -CCTCTATCAGCAGCCATATCAATAATGCTCTT--TTGTGAAATTTCCCAGACTGTCTTG 376933 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || | ||||| | || ||||| || | | | ||||| ||||||||| | |||| Sbjct 376934 TATAATTTCTTTAATTCGTCTGGAATGTTCGGTAAGTTTTGAATAGAGCCAT-TATCTTG 376992 Query 115798 ACC-ATGAGATCCTTCATATCCTTTGACCAGAGACC--AATCTTCTTGAGATCCT--CCA 115852 | |||| || ||||||| | | ||| ||||| |||| || | || | | | Sbjct 376993 AATGATGAAATTCTTCATAGCATCGCTCCATAGACCTAAATCAACTAAATCTCTTAGCAA 377052 Query 115853 CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGG 115912 | | | ||||||| || ||||| || || | ||| || ||||| | Sbjct 377053 ATATGGG----TTGACAATTTGGAATTCACCTGCTAGAACTCTTCTTGAGTAAATGTTAG 377108 Query 115913 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 115972 |||||||| || |||||||| |||| |||||| ||||| | || || || || |||| Sbjct 377109 AAGTGTATGGTTCGAAGCACTCGTTGTAACCCAAAATTTGTGAAGTTGAAGCAGTAGGCA 377168 Query 115973 TGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGT 116032 | || |||| | | ||| | | ||| | ||| | |||||| | | Sbjct 377169 TTGGAGCCAGCAATAAAGAGTTTCTCAAACCGTGCTTGGAAATTCTTTCCTTTAATAGAT 377228 Query 116033 CCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090 |||| || || | || ||| || | |||| | || || || | | |||||| Sbjct 377229 CCCAATCCCATAAATCAG--TTGGCTTCTTACCCCATAAGTCGAATTGTAATAGACCTTG 377286 Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC----GG 116146 || ||||| || || | || |||||||||| || || | | |||||| | Sbjct 377287 AGAAGCTGGAGAACCTTGGAAATTCTCATATGGCCCATCTAAGATTGACAATTCAATCGA 377346 Query 116147 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 116206 |||| || | || || || ||||| || |||||||| || |||| || ||| Sbjct 377347 AGCT----TCTAAAGCAGCATGGTACATGGTTTCAAAAATTTGAATGTTCAAGTCCCTGG 377402 Query 116207 CCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACAC 116266 |||| ||||||||| | | | | || || || || || | |||||| |||| Sbjct 377403 CCTCTGGGGAATCAAATGGTAATCTCAATTGCATGAAAACGTCAGCCAAACCTTGAACAC 377462 Query 116267 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAAT 116326 | | ||||||| | | | |||| ||||| ||| ||| || || || ||| | | Sbjct 377463 CAACAGCAATTGGTCTGTTTTTCATGTTAGATGTTCTAGCCTCTTCAACAGGGTAATAGT 377522 Query 116327 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 116386 | || || || | | | || | || || | |||||||| || | |||||| || |||| Sbjct 377523 TTCTGTCAATGATCATGTTCAAGTTCTTAGCAACAACCTTAGTAACTTCATGCAGTTTTT 377582 Query 116387 CGTAATCAAAACTGCGAGTCTCT---TC--ATT-GACATACTTAGGAAGGGCGATTGACG 116440 | | | | | | | |||| || ||| ||| | ||| | || | || | Sbjct 377583 CAAAGTTATACCATGATGACTCTGAATCCGATTCGACGAATGCAGGCAAAGCCACGGAAG 377642 Query 116441 CCAGATTACACACAGAGGTCTCATCCTTATCAGTG-TACTCTATAATTTCCGTACACAAA 116499 | || ||||| || | || || | | || || || | |||||| ||||| Sbjct 377643 CTAGGTTACAGACGGCAACTTCTTC-TGGTGAGGAATATTCAACAATTTCACAGCACAAG 377701 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || || |||||| || |||||||||||||| || || ||| ||||| ||||||||| Sbjct 377702 TTAGATGACTTAATAGTACCCAAGTTCTTTTGGTTGGATTTTTCATTACAAGCATCCTTG 377761 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618 || | |||| |||| || || || |||||||| | | | |||||| | ||||| | | Sbjct 377762 TATAACATAAATGGAGTGCCTGTTTCCGTTTGTGCTTCTAAAATAGCATACCATAGCTTT 377821 Query 116619 GGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTC 116678 | | || | ||||| | ||| || || || || || || || || | || || Sbjct 377822 TGAGCCTTG-ACAGTTTGTCTACCTCTGCCTTCTTCTTCATATTTGGTATATAAAGCTTC 377880 Query 116679 AAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCA 116738 ||| || ||||| | || | || || || | || |||| | || ||| Sbjct 377881 AAATTCATCACCGTAAAGTTCGTGTAAACCAGGGGCTTCGGAAGGGGAGAATAAAGTCCA 377940 Query 116739 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 116798 |||| || || |||||| | |||||| || | ||||| ||||| | |||| ||| || Sbjct 377941 TTGAGCATTCTGCTCAACTCTCTTCATAAACAAATCTGGAATCCATAAGGCCGGGAATAG 378000 Query 116799 ATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 116857 ||| | | | || | ||||| | || ||||| | | || | || || | || Sbjct 378001 ATCTCTAGCTCTGATC-TCTTCCTTACCGTGATTCTTTCTAATATCGATGAAATCAAAGA 378059 Query 116858 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGACGACCAGCC 116913 |||| | ||||| ||||| | ||| | |||| | ||| ||| | ||| || Sbjct 378060 TATCAGAATGCCATGGTTCAATGTATAAAGCGAAAGCACCTGGTCTTTTG-TTACCCCCC 378118 Query 116914 TGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGAT 116973 |||| ||||| || || || ||| || || | || ||||||||||||||| | ||| Sbjct 378119 TGGTCAACATATCTTGCAGTGTTGTTGAAAACTCTAATCATTGGAATGATACCGTTAGAA 378178 Query 116974 TGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCA 117033 ||||| || || |||| || | | ||| | | || ||||| | |||| Sbjct 378179 GTACCATTAGTACCGGCAATATATGAACCAGTAGATCTAATGTTATGAATGTGTAAACCA 378238 Query 117034 ATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 117093 ||||| || || ||| || || || || | | | | | | | || || |||||| Sbjct 378239 ATACCACCAGCAGTCTTGGAAATCAAAGCACATTGCTTCAAAGTATCATAAATACCATCG 378298 Query 117094 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCA 117153 || || || | || | || | | ||||| |||||||||| || |||||| Sbjct 378299 ATAGAATCGTCTTTCATAGCAACTAAAAAGCATGAAGACATTTGTGCGTGAGGAGTACCA 378358 Query 117154 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTC 117213 || || || | ||||||| ||||| | || | || ||||| | | || || Sbjct 378359 GCATTAAATAATGTTGGTGAAGCGTGAGTAAAGTATCTTTCTGACATGTAGTTATAAGTT 378418 Query 117214 TCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTAT 117273 || | ||| | ||| | || ||||| ||||| || || || | ||||| | || Sbjct 378419 TCTATGACCTTAGCAATATTATCACCGTGGATACCAATAGAAACTCTCATAACTAAGTGC 378478 Query 117274 TGGGGTGTTTC 117284 || ||| |||| Sbjct 378479 TGTGGTCTTTC 378489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506954597120