Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 291 1e-73 seq1 96.9 4e-15 >seq5 Length=1013952 Score = 291 bits (322), Expect = 1e-73 Identities = 1065/1644 (65%), Gaps = 45/1644 (3%) Strand=Plus/Minus Query 111711 CACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTC 111770 ||||| ||||||| | || || |||||||| || | |||||||| || || Sbjct 378384 CACGCTTCACCAACATTATTTAATGCTGGTACTCCTCACGCACAAATGTCTTCATGCTTT 378325 Query 111771 CTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCC 111830 | |||| | || || ||||| ||| |||| ||||| | ||| | | ||||||| Sbjct 378324 TTAGTTGCTATGAAAGACGATTCTATCGATGGTATTTATGATACTTTGAAGCAATGTGCT 378265 Query 111831 CAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG 111890 || || ||| ||||||||||| || | ||||| ||| | | ||| | | Sbjct 378264 TTGATTTCCAAGACTGCTGGTGGTATTGGTTTACACATTCATAACATTAGATCTACTGGT 378205 Query 111891 TCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTT 111950 || |||| ||||| |||||| || | ||||| ||||||||| || | || || Sbjct 378204 TCATATATTGCCGGTACTAATGGTACTTCTAACGGTATCATTCCAATGATTAGAGTTTTC 378145 Query 111951 AACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGT 112006 ||| ||| || | ||||| |||| | ||| | ||| || || |||| | Sbjct 378144 AACAACACTGCAAGATATGTTGACCAGGG-GGGTAACAAAAGACCAGGTGCTTTCGCTTT 378086 Query 112007 CTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGG 112066 || |||| |||||||| | |||||| | || ||| | || | | || || || Sbjct 378085 ATACATTGAACCATGGCATTCTGATATCTTTGATTTCATCGATATTAGAAAGAATCACGG 378026 Query 112067 TGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 112125 | | || ||| | | || | ||||| ||| | || | |||||||||||| | || | Sbjct 378025 TAAGGAAGAGAT-CAGAGCTAGAGATCTATTCCCGGCCTTATGGATTCCAGATTTGTTTA 377967 Query 112126 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTC 112185 |||||||||||||| ||| || | ||| || | || | || | | || || ||| Sbjct 377966 TGAAGAGAGTTGAGCAGAATGCTCAATGGACTTTATTCTCCCCTTCCGAAGCCCCTGGTT 377907 Query 112186 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTC 112245 | ||| ||||| || |||||||| | || || || || || |||||| | Sbjct 377906 TACACGAACTTTACGGTGATGAATTTGAAGCTTTATATACCAAATATGAAGAAGAAGGCA 377847 Query 112246 GGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCG 112305 | | | || || ||| | | ||| | |||||| | | | ||||| | Sbjct 377846 GAGGTAGACAAACTGTCAAGGCTCAAAAGCTATGGTATGCTATTTTAGAAGCACAAACGG 377787 Query 112306 AGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGA 112365 | || || || |||| |||| | ||||| || || ||||| |||| || ||||||| Sbjct 377786 AAACAGGCACTCCATTTATGTTATACAAGGATGCTTGTAATGAAAAATCCAACCAAAAGA 377727 Query 112366 ATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT-TTACAGACAAA 112424 | |||||| || ||| || ||| | || ||||| | |||| || | || | Sbjct 377726 ACTTGGGTACTATTAAGTCATCTAACTTGTGCTGTGAAATTGTTGAATATTCCTCACCA- 377668 Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484 || || || || |||||||| || || | ||| | || | || || | || Sbjct 377667 GAAGAAGTTGCCGTCTGTAACCTAGCTTCCGTGGCTTTGCCTGCATTCGTCGAATCGGAT 377608 Query 112485 ACAAAGACATT------TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAA 112538 || || ||| | | | ||||||||| || |||||||| || ||| | || Sbjct 377607 TCAGAGTCATCATGGTATAACTTTGAAAAACTGCATGAAGTTACTAAGGTTGTTGCTAAG 377548 Query 112539 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAAT 112598 ||| | |||| | ||||| ||||| | |||||| ||||| ||| | | |||||| Sbjct 377547 AACTTGAACATGATCATTGACAGAAACTATTACCCTGTTGAAGAGGCTAGAACATCTAAC 377488 Query 112599 ATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCT-TTG 112657 |||| | || | ||||||| | | ||||| |||||| | || || || ||||| | ||| Sbjct 377487 ATGAAAAACAGACCAATTGCTGTTGGTGTTCAAGGTTTGGCTGACGTTTTCATGCAATTG 377428 Query 112658 TCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAAT 112717 || ||||||||||| || || | ||| | || | || ||||| || || Sbjct 377427 AGATTAC-CATTTGATTCCCCAGAGGCCAGGGACTTGAACATTCAAATTTTTGAAACCAT 377369 Query 112718 GTATCACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAGAGGTTGATGGTCCATATGA 112774 ||| || || ||| | || || |||| || ||| || | ||||| |||||||| Sbjct 377368 GTACCATGCTGCTTTAGAAGC---TTCGATTGAATTGTCAATCTTAGATGGGCCATATGA 377312 Query 112775 AACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGA--TATGTGGGAAGGT 112832 | || | |||||||||||||| ||||| | | ||||| || |||| || || Sbjct 377311 GAATTTCCAAGGTTCTCCAGCTTCTCAAGGTCTATTACAATTCGACTTATGGGGTAA--- 377255 Query 112833 GAGACCAA--GCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTC 112890 || |||| | || | | || ||||| | |||||| | || || | ||| Sbjct 377254 GAAGCCAACTGATTTA-TGGGATTGGGATCTATTAAAGGAAAGAATTTCCAAGCACGGTT 377196 Query 112891 TTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 112950 | | ||| | | ||| |||| |||||||| || || || || ||||||| |||||| Sbjct 377195 TGAGAAACTCTTTATTGCTGGCTCCAATGCCTACTGCTTCAACTTCACAAATTTTGGGTT 377136 Query 112951 ATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAG 113010 | || || ||||| ||||| ||||| | ||||| || |||||| || || || | Sbjct 377135 ACAACGAGTGCTTCGAACCATACACTTCTAACATTTACTCAAGAAGAGTTCTAGCAGGTG 377076 Query 113011 AGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT--GGTCTCTGGTC 113068 | || ||||||||| ||| | | || | | |||| ||||| ||| Sbjct 377075 AATTCCAAATTGTCAAC--CCATATTTGCTAAGAGATTTAGTTGATTTAGGTCTATGGAG 377018 Query 113069 CAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATAT 113128 | | | ||||||| || |||| | ||| ||| || |||||||| | | | || Sbjct 377017 CGATGCTATGAAGAATTTCATCATTCAAGATAATGGCTCTATTCAAAACTTACCGAACAT 376958 Query 113129 TCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTC 113186 |||||| ||| | ||||| || ||| ||||| ||||||| ||| | ||| | Sbjct 376957 TCCAGACGAATTAAAGAAATTATACAAGACAGTCTGGGAAATTTCACAA--AAGAGCATT 376900 Query 113187 ATTGACATGGCCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTATT 113245 ||||| ||||| || ||| | ||| |||| |||||||||| |||| ||||| ||| Sbjct 376899 ATTGATATGGCTGCTGATAGAGGT-GCTTACATTGATCAATCTCAATCAATGAA--CATT 376843 Query 113246 CATGGAAAG--TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAG 113303 || |||| ||||| ||| ||| | | || |||||| | ||| ||||||||||| Sbjct 376842 CACTTAAAGAACCCAACTATGGGTAAGTTAACGTCCATGCACTTCTACGGTTGGAAGAAG 376783 Query 113304 GGTCTCAAAACGGGGATGTATTAC 113327 ||| | || || || ||||| ||| Sbjct 376782 GGTTTGAAGACTGGTATGTACTAC 376759 >seq1 Length=3681944 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114 |||||| | ||||||||||||||||| |||| || | || |||||| | || || Sbjct 2805866 CTTTCCGATGGCATCAATCTCATCAACAAAGATAATAGAAGGAGCATTTTCTCTGGCAAC 2805925 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174 || || | || || || | || || |||||||||||||| || ||||| | | Sbjct 2805926 TTTGAACAATTCACGAACTCTAGAAGCACCAACACCAACAAACATTTCAACAAATTCAGA 2805985 Query 16175 GGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233 | ||| | | || ||| || |||| || ||||| ||| | ||| ||| | |||| Sbjct 2805986 ACCAGAA-ACAGAATAGAATGGAACATCAGCCTCACCAGCAGTTGCTTTGGCTAACAGAG 2806044 Query 16234 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||||||| |||||||| ||| | | | |||||||| |||||||| ||||| Sbjct 2806045 TCTTACCGGTACCTGGAGGACCTGATAAAATGGCACCTCTCGGAATCTTAGCGCC 2806099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742151703040