Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq5 291 1e-73
seq1 96.9 4e-15
>seq5
Length=1013952
Score = 291 bits (322), Expect = 1e-73
Identities = 1065/1644 (65%), Gaps = 45/1644 (3%)
Strand=Plus/Minus
Query 111711 CACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTC 111770
||||| ||||||| | || || |||||||| || | |||||||| || ||
Sbjct 378384 CACGCTTCACCAACATTATTTAATGCTGGTACTCCTCACGCACAAATGTCTTCATGCTTT 378325
Query 111771 CTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCC 111830
| |||| | || || ||||| ||| |||| ||||| | ||| | | |||||||
Sbjct 378324 TTAGTTGCTATGAAAGACGATTCTATCGATGGTATTTATGATACTTTGAAGCAATGTGCT 378265
Query 111831 CAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG 111890
|| || ||| ||||||||||| || | ||||| ||| | | ||| | |
Sbjct 378264 TTGATTTCCAAGACTGCTGGTGGTATTGGTTTACACATTCATAACATTAGATCTACTGGT 378205
Query 111891 TCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTT 111950
|| |||| ||||| |||||| || | ||||| ||||||||| || | || ||
Sbjct 378204 TCATATATTGCCGGTACTAATGGTACTTCTAACGGTATCATTCCAATGATTAGAGTTTTC 378145
Query 111951 AACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGT 112006
||| ||| || | ||||| |||| | ||| | ||| || || |||| |
Sbjct 378144 AACAACACTGCAAGATATGTTGACCAGGG-GGGTAACAAAAGACCAGGTGCTTTCGCTTT 378086
Query 112007 CTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGG 112066
|| |||| |||||||| | |||||| | || ||| | || | | || || ||
Sbjct 378085 ATACATTGAACCATGGCATTCTGATATCTTTGATTTCATCGATATTAGAAAGAATCACGG 378026
Query 112067 TGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 112125
| | || ||| | | || | ||||| ||| | || | |||||||||||| | || |
Sbjct 378025 TAAGGAAGAGAT-CAGAGCTAGAGATCTATTCCCGGCCTTATGGATTCCAGATTTGTTTA 377967
Query 112126 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTC 112185
|||||||||||||| ||| || | ||| || | || | || | | || || |||
Sbjct 377966 TGAAGAGAGTTGAGCAGAATGCTCAATGGACTTTATTCTCCCCTTCCGAAGCCCCTGGTT 377907
Query 112186 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTC 112245
| ||| ||||| || |||||||| | || || || || || |||||| |
Sbjct 377906 TACACGAACTTTACGGTGATGAATTTGAAGCTTTATATACCAAATATGAAGAAGAAGGCA 377847
Query 112246 GGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCG 112305
| | | || || ||| | | ||| | |||||| | | | ||||| |
Sbjct 377846 GAGGTAGACAAACTGTCAAGGCTCAAAAGCTATGGTATGCTATTTTAGAAGCACAAACGG 377787
Query 112306 AGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGA 112365
| || || || |||| |||| | ||||| || || ||||| |||| || |||||||
Sbjct 377786 AAACAGGCACTCCATTTATGTTATACAAGGATGCTTGTAATGAAAAATCCAACCAAAAGA 377727
Query 112366 ATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT-TTACAGACAAA 112424
| |||||| || ||| || ||| | || ||||| | |||| || | || |
Sbjct 377726 ACTTGGGTACTATTAAGTCATCTAACTTGTGCTGTGAAATTGTTGAATATTCCTCACCA- 377668
Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484
|| || || || |||||||| || || | ||| | || | || || | ||
Sbjct 377667 GAAGAAGTTGCCGTCTGTAACCTAGCTTCCGTGGCTTTGCCTGCATTCGTCGAATCGGAT 377608
Query 112485 ACAAAGACATT------TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAA 112538
|| || ||| | | | ||||||||| || |||||||| || ||| | ||
Sbjct 377607 TCAGAGTCATCATGGTATAACTTTGAAAAACTGCATGAAGTTACTAAGGTTGTTGCTAAG 377548
Query 112539 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAAT 112598
||| | |||| | ||||| ||||| | |||||| ||||| ||| | | ||||||
Sbjct 377547 AACTTGAACATGATCATTGACAGAAACTATTACCCTGTTGAAGAGGCTAGAACATCTAAC 377488
Query 112599 ATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCT-TTG 112657
|||| | || | ||||||| | | ||||| |||||| | || || || ||||| | |||
Sbjct 377487 ATGAAAAACAGACCAATTGCTGTTGGTGTTCAAGGTTTGGCTGACGTTTTCATGCAATTG 377428
Query 112658 TCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAAT 112717
|| ||||||||||| || || | ||| | || | || ||||| || ||
Sbjct 377427 AGATTAC-CATTTGATTCCCCAGAGGCCAGGGACTTGAACATTCAAATTTTTGAAACCAT 377369
Query 112718 GTATCACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAGAGGTTGATGGTCCATATGA 112774
||| || || ||| | || || |||| || ||| || | ||||| ||||||||
Sbjct 377368 GTACCATGCTGCTTTAGAAGC---TTCGATTGAATTGTCAATCTTAGATGGGCCATATGA 377312
Query 112775 AACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGA--TATGTGGGAAGGT 112832
| || | |||||||||||||| ||||| | | ||||| || |||| || ||
Sbjct 377311 GAATTTCCAAGGTTCTCCAGCTTCTCAAGGTCTATTACAATTCGACTTATGGGGTAA--- 377255
Query 112833 GAGACCAA--GCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTC 112890
|| |||| | || | | || ||||| | |||||| | || || | |||
Sbjct 377254 GAAGCCAACTGATTTA-TGGGATTGGGATCTATTAAAGGAAAGAATTTCCAAGCACGGTT 377196
Query 112891 TTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 112950
| | ||| | | ||| |||| |||||||| || || || || ||||||| ||||||
Sbjct 377195 TGAGAAACTCTTTATTGCTGGCTCCAATGCCTACTGCTTCAACTTCACAAATTTTGGGTT 377136
Query 112951 ATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAG 113010
| || || ||||| ||||| ||||| | ||||| || |||||| || || || |
Sbjct 377135 ACAACGAGTGCTTCGAACCATACACTTCTAACATTTACTCAAGAAGAGTTCTAGCAGGTG 377076
Query 113011 AGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT--GGTCTCTGGTC 113068
| || ||||||||| ||| | | || | | |||| ||||| |||
Sbjct 377075 AATTCCAAATTGTCAAC--CCATATTTGCTAAGAGATTTAGTTGATTTAGGTCTATGGAG 377018
Query 113069 CAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATAT 113128
| | | ||||||| || |||| | ||| ||| || |||||||| | | | ||
Sbjct 377017 CGATGCTATGAAGAATTTCATCATTCAAGATAATGGCTCTATTCAAAACTTACCGAACAT 376958
Query 113129 TCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTC 113186
|||||| ||| | ||||| || ||| ||||| ||||||| ||| | ||| |
Sbjct 376957 TCCAGACGAATTAAAGAAATTATACAAGACAGTCTGGGAAATTTCACAA--AAGAGCATT 376900
Query 113187 ATTGACATGGCCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTATT 113245
||||| ||||| || ||| | ||| |||| |||||||||| |||| ||||| |||
Sbjct 376899 ATTGATATGGCTGCTGATAGAGGT-GCTTACATTGATCAATCTCAATCAATGAA--CATT 376843
Query 113246 CATGGAAAG--TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAG 113303
|| |||| ||||| ||| ||| | | || |||||| | ||| |||||||||||
Sbjct 376842 CACTTAAAGAACCCAACTATGGGTAAGTTAACGTCCATGCACTTCTACGGTTGGAAGAAG 376783
Query 113304 GGTCTCAAAACGGGGATGTATTAC 113327
||| | || || || ||||| |||
Sbjct 376782 GGTTTGAAGACTGGTATGTACTAC 376759
>seq1
Length=3681944
Score = 96.9 bits (106), Expect = 4e-15
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114
|||||| | ||||||||||||||||| |||| || | || |||||| | || ||
Sbjct 2805866 CTTTCCGATGGCATCAATCTCATCAACAAAGATAATAGAAGGAGCATTTTCTCTGGCAAC 2805925
Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174
|| || | || || || | || || |||||||||||||| || ||||| | |
Sbjct 2805926 TTTGAACAATTCACGAACTCTAGAAGCACCAACACCAACAAACATTTCAACAAATTCAGA 2805985
Query 16175 GGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233
| ||| | | || ||| || |||| || ||||| ||| | ||| ||| | ||||
Sbjct 2805986 ACCAGAA-ACAGAATAGAATGGAACATCAGCCTCACCAGCAGTTGCTTTGGCTAACAGAG 2806044
Query 16234 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
||||||| |||||||| ||| | | | |||||||| |||||||| |||||
Sbjct 2806045 TCTTACCGGTACCTGGAGGACCTGATAAAATGGCACCTCTCGGAATCTTAGCGCC 2806099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742151703040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |