Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 237 2e-57 seq1 111 2e-19 seq7 84.2 3e-11 >seq5 Length=1013952 Score = 237 bits (262), Expect = 2e-57 Identities = 1121/1752 (64%), Gaps = 53/1752 (3%) Strand=Plus/Plus Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTG 105655 |||||||| || ||||| | || | ||||| |||| | ||||| || | | ||| Sbjct 376760 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTA 376819 Query 105656 GACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATG-AAGCGACC 105714 ||| ||||| | | | | || ||||| |||| || |||||| |||| ||| Sbjct 376820 CCCATAGTTGGGTTCTTTAAGTGAATGTTCATTGATTGAGATTGATCAATGTAAGC-ACC 376878 Query 105715 ACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCCACACTGTGCGGTAG 105772 | | || ||||||||||| | ||| | ||| ||||||| ||||| ||| Sbjct 376879 TCTATCAGCAGCCATATCAATAATGCTCTT--TTGTGAAATTTCCCAGACTGTCTTGTAT 376936 Query 105773 AGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACC 105832 | ||||| | || ||||| || | | | |||||||| || || | | | Sbjct 376937 AATTTCTTTAATTCGTCTGGAATGTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATG 376996 Query 105833 ATGAGATCCTTCATATCCTTGGACCAAAGACC--AATCTTCTTGAGATCATTGACGAGAT 105890 |||| || ||||||| | | | ||| ||||| |||| || | || | | | || Sbjct 376997 ATGAAATTCTTCATAGCATCGCTCCATAGACCTAAATCAACTAAATCTCTTAGCAAATAT 377056 Query 105891 GCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGT 105950 | ||||||||| || || || || || |||||| || ||||| | |||| Sbjct 377057 GG--GTTGACAATTTGGAATTCACCTGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGT 377114 Query 105951 AGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTG 106010 | ||||| ||||| || || | |||||| ||||||| || || || || |||||||| | Sbjct 377115 ATGGTTCGAAGCACTCGTTGTAACCCAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAG 377174 Query 106011 CCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCGTTCCTTGAGAACATCCC 106067 ||| ||| | | ||| | | ||| | |||| || | |||||| | | ||||| Sbjct 377175 CCAGCAATAAAGAGTTTCTCAAACCGTG---CTTGGAAATTCTTTCCTTTAATAGATCCC 377231 Query 106068 AGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATA--TCAAATTGAAGCACCCCTTGG 106123 | || || | || |||| ||| || || |||| || ||||| | | ||||| Sbjct 377232 AATCCCATAAATCAG-TTGGCTTC---TTACCCCATAAGTCGAATTGTAATAGACCTTGA 377287 Query 106124 GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGG--GCTTCAGCCAATTCACAGC 106181 || | |||||||| | || ||||||| | || | | || | ||||||| Sbjct 377288 GAAGCTGGAGAACCTTGGAAATTCTCATATGGCCCATCTAAGATTGA--CAATTCAATCG 377345 Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241 || || | | || || |||||||||||||| || || |||| ||| |||| | Sbjct 377346 AAGCTTCTAAAGCAGCATGGTACATGGTTTCAAAAATTTGAATGTTCAAGTCCCTGGCCT 377405 Query 106242 CATCTGAATCAAATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGACCTTGAACAC 106298 | |||||||||| ||| | ||| || || || || || | ||||||||||| Sbjct 377406 CTGGGGAATCAAATG-GTAAT--CTCAATTGCATGAAAACGTCAGCCAAACCTTGAACAC 377462 Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 106358 | | | |||| ||||||| | ||| ||||| ||| || ||||| || ||| | | Sbjct 377463 CAACAGCAATTGGTCTGTTTTTCATGTTAGATGTTCTAGCCTCTTCAACAGGGTAATAGT 377522 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418 |||||||||||| ||| | || || | ||||| ||| || | |||||| ||||||| Sbjct 377523 TTCTGTCAATGATCATGTTCAAGTTCTTAGCAACAACCTTAGTAACTTCATGCAGTTTTT 377582 Query 106419 CATAATCAAAAGTGCGAGTCTCT---TC--ATT-GACATACTTTGGAAGGGCGATTGATG 106472 || | | | | | |||| || ||| ||| | || | || | || | Sbjct 377583 CAAAGTTATACCATGATGACTCTGAATCCGATTCGACGAATGCAGGCAAAGCCACGGAAG 377642 Query 106473 CCAAATTGCAAACAGC--CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAA 106530 | | || || || || | ||| | | | | || || | |||||| ||||| Sbjct 377643 CTAGGTTACAGACGGCAACTTCTTCTGGTGAG--GAATATTCAACAATTTCACAGCACAA 377700 Query 106531 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTT 106590 ||| || |||||| || ||||| ||||||||||| |||| || || |||||||| Sbjct 377701 GTTAGATGACTTAATAGTACCCAAGTTCTTTTGGTTGGATTTTTCATTACAAGCATCCTT 377760 Query 106591 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CAT 106649 ||| | ||| | || || || || ||||| |||| | | ||| || | ||| | | | Sbjct 377761 GTATAACATAAATGGAGTGCCTGTTTCCGTTTGTGCTTCTAAAATAGCATACCATAGCTT 377820 Query 106650 CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTT 106709 | | || | ||| | | | | || || | || || || || || | |||| Sbjct 377821 TTGAGCCTTG-ACAGTTTGTCTACCTCTGCCTTCTTCTTCATATTTGGTATATAAAGCTT 377879 Query 106710 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 106769 |||| || ||||| ||| | ||| || || | | || |||| | || || Sbjct 377880 CAAATTCATCACCGTAAAGTTCGTGTAAACCAGGGGCTTCGGAAGGGGAGAATAAAGTCC 377939 Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829 ||||| || || |||||| | |||||| || | ||||||||||| | || | || | Sbjct 377940 ATTGAGCATTCTGCTCAACTCTCTTCATAAACAAATCTGGAATCCATAAGGCCGGGAATA 377999 Query 106830 GATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 106888 |||||||| | | || | ||||| | ||| || || || | || | ||| || | | Sbjct 378000 GATCTCTAGCTCTGATC-TCTTCCTTACCGTGATTCTTTCTAATATCGATGAAATCAAAG 378058 Query 106889 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGC 106944 ||||| | |||||||| |||| || | |||| || || |||| | ||| | Sbjct 378059 ATATCAGAATGCCATGGTTCAATGTATAAAGCGAAAGCACCTGGTCTTTTGTTACCCCCC 378118 Query 106945 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 107004 | | | ||||| | || ||| ||| || || | || ||||||||| ||||| | || Sbjct 378119 TGG-TCAACATATCTTGCAGTGTTGTTGAAAACTCTAATCATTGGAATGATACCGTTAGA 378177 Query 107005 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 107064 |||||| || || |||| || | | | ||| | | ||| ||||| | || Sbjct 378178 AGTACCATTAGTACCGGCAATATATGAACCAGTAGATCTAATGTTATGAATGTGTAAACC 378237 Query 107065 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 107124 |||||| ||||| ||| || || ||||| | | | | ||| |||| ||||| | Sbjct 378238 AATACCACCAGCAGTCTTGGAAATCAAAGCACATTGCTTCAAAGTATCATAAATACCATC 378297 Query 107125 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACC 107184 ||| || || || || | || | | ||||| ||||| || | || ||||| Sbjct 378298 GATAGAATCGTCTTTCATAGCAACTAAAAAGCATGAAGACATTTGTGCGTGAGGAGTACC 378357 Query 107185 AGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGT 107244 |||||| || | ||||||| |||||| | || | || ||||| | || || || Sbjct 378358 AGCATTAAATAATGTTGGTGAAGCGTGAGTAAAGTATCTTTCTGACATGTAGTTATAAGT 378417 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTA 107304 || | ||| | |||| | || |||||||| || || | || | ||||| | || Sbjct 378418 TTCTATGACCTTAGCAATATTATCACCGTGGATACCAATAGAAACTCTCATAACTAAGTG 378477 Query 107305 TTGGGGTGTTTC 107316 || ||| |||| Sbjct 378478 CTGTGGTCTTTC 378489 Score = 113 bits (124), Expect = 5e-20 Identities = 346/527 (66%), Gaps = 21/527 (4%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||| ||||||| |||| | |||||| ||||| || ||| Sbjct 647713 GCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCC 647654 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 117392 ||||| || || | ||| ||||||||| | |||| ||| ||||| || ||||||||||| Sbjct 647653 GGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCA-AATGAACCAGAGAAGAAGAT 647595 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA 117452 ||| || ||| ||||| |||| | | |||||||| ||| | | ||| | Sbjct 647594 ACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCAT 647535 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512 |||| |||| ||||| | ||||| | || || || || | ||| | || || | || Sbjct 647534 CCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAA 647475 Query 117513 TAA-----CTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATAT 117567 ||| | || || || | |||||||| || |||| |||||| ||| || Sbjct 647474 TAAGAAGTCAGCCTCCTT-----TGGATCCTTAACATAGGTGTCGATCAATAATGAGTAA 647420 Query 117568 GTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCT 117626 ||||| || | ||| ||| ||| | || | ||||||| | ||||| Sbjct 647419 GTTTCAGAGTGGATGTTTTCCATCATGATCTGGA-AACCGTAGAAACACTTGGCTTCTGG 647361 Query 117627 TATCTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 117686 || || ||||| | | ||| || | | | ||||| |||||| || ||||| | Sbjct 647360 AATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGC 647301 Query 117687 AGCAAAGAATGCCAGGATGTACTT--TATGAATTTCTTTTCATTTTCATTCA---GGGTC 117741 |||||||| || | | ||| ||||| |||| ||||||| | | | Sbjct 647300 TGCAAAGAAAGCTA--AAACTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTG 647243 Query 117742 TTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 |||||||| | | ||| || || ||||||| |||||| |||||||| Sbjct 647242 TTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCA 647196 >seq1 Length=3681944 Score = 111 bits (122), Expect = 2e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421 |||||| | ||||||||||||||||| |||| |||| | || |||||| | ||| | Sbjct 2805866 CTTTCCGATGGCATCAATCTCATCAACAAAGATAATAGAAGGAGCATTTTCTCTGGCAAC 2805925 Query 9422 TTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9481 || || | || ||||| || || || |||||||||||||| || ||||| | | Sbjct 2805926 TTTGAACAATTCACGAACTCTAGAAGCACCAACACCAACAAACATTTCAACAAATTCAGA 2805985 Query 9482 GGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9540 | ||| | | || ||| || |||| || ||||| ||| | ||| ||| | |||| Sbjct 2805986 ACCAGAA-ACAGAATAGAATGGAACATCAGCCTCACCAGCAGTTGCTTTGGCTAACAGAG 2806044 Query 9541 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||||||| |||||||| ||| | | | |||||| | |||||||| ||||| Sbjct 2806045 TCTTACCGGTACCTGGAGGACCTGATAAAATGGCACCTCTCGGAATCTTAGCGCC 2806099 >seq7 Length=781880 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103 || ||| | ||||||||| |||| ||||| |||| |||||||||||| |||||| Sbjct 265530 TACGGTAGAGTTGCACCAAGATCTGGTCTTGCTGCAAAGCATGGTATTTCCACTGGTGCT 265471 Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163 ||||||||||| |||| || | ||| || | || | || | ||||| ||| |||| Sbjct 265470 GGTGTTATTGACGCCGATTACAGAGGCGAGATTAAGATTATTTTATTCAACCACTCAGAC 265411 Query 155164 AAAGACTTTGAGGT 155177 || || || ||||| Sbjct 265410 AAGGATTTCGAGGT 265397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980564007680