Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 147 3e-30 >seq2 Length=3419278 Score = 147 bits (162), Expect = 3e-30 Identities = 281/410 (69%), Gaps = 8/410 (2%) Strand=Plus/Plus Query 154708 AAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAGTGCTGT 154765 ||||||| | |||||| |||| ||| || || || || |||||||| |||||| Sbjct 2019492 AAAGAAAAATTGTTTTGATCCCAGTTAGT--GCTCACGGTACCAATCCTGCCTCTGCTGT 2019549 Query 154766 CATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAA 154825 ||||| || |||||||||| |||||||||| | |||||||| | || | | Sbjct 2019550 GATGGCTGGCCTGAAAGTTGTCCCTGTCAAGTGTTTAGTGAATGGTAACTTGGATTTAGA 2019609 Query 154826 AGATCTAGAGAAGAAAGCAATCATGAATACATT--TGAACTGTCATGTATTATGATTACA 154883 |||| | | ||| | | || || || | |||| || | |||||||||||| Sbjct 2019610 AGATTTGAAATTGAAGGT--TGATAAACACTCTGCTGAATTGGCTGCAATTATGATTACA 2019667 Query 154884 TACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCAT 154943 ||||| || || | ||| | |||||| | | |||||| | ||| | |||||| Sbjct 2019668 TACCCGTCAACTTACGGTATGTTTGAACCAACTATTAGAGAAGCTTGTTCCTTAGTTCAT 2019727 Query 154944 GACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCA 155003 | || |||||||| || ||| | ||||| || ||| | || || || || ||| || | Sbjct 2019728 GCTAACGGTGGTCAAGTCTATTTGGATGGTGCTAATATGAACGCCCAAGTTGGATTAACT 2019787 Query 155004 AAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATT 155063 |||| | || | ||||| ||||| || ||| | ||||| || || || || ||| Sbjct 2019788 TCACCAGGCGACTTAGGTGCTGATGTTTGCCATTTGAACTTGCACAAGACGTTTGCGATT 2019847 Query 155064 CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACA 155113 ||||| || |||||||| ||||| || ||||| || |||| || |||| Sbjct 2019848 CCACACGGTGGTGGAGGACCTGGTGTTGGTCCAATCTGTGTTGCTGAACA 2019897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212568314880