Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq5 230 3e-55 >seq5 Length=1013952 Score = 230 bits (254), Expect = 3e-55 Identities = 570/856 (67%), Gaps = 28/856 (3%) Strand=Plus/Minus Query 36859 CCTTATTACTATT---CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAA 36915 ||||| |||| || |||||| || ||||| || || |||| |||| || | Sbjct 648036 CCTTAGTACTCTTGGCCATAACACCAGCCTTTTGGTAGTCGGACACTCTCTTTTCAAAGA 647977 Query 36916 AATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAGA-----TGT 36970 | || ||||| || ||| || |||||||||||||| || ||||| || ||| Sbjct 647976 AGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAATGGGTTGTTAACCTTGT 647917 Query 36971 ATTATATATAGTA--CTACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATG 37028 | | | | | | ||| | |||||| | || | |||| |||||||| || | | Sbjct 647916 AGTGCTTCTTGCAACCTAAA-GATAATA-----ATAATC-TATCAGCAACAAACTCAACG 647864 Query 37029 TATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAG 37087 |||| ||||| | ||| ||| ||||| | || | ||| | ||||| ||||| Sbjct 647863 TATTGGCACATCAATTCTGCGTTCATACCCAATAATGCACATGGTAAGGCATCCGTGAAG 647804 Query 37088 AAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGG 37147 | | ||||| || || || || ||| || || |||| || ||||||| |||| Sbjct 647803 TA-TCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTCTTCATTTGG 647745 Query 37148 GGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCT 37207 | | || | | || |||||||| ||||||||| ||||||||||||||||| Sbjct 647744 AGTGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCT 647685 Query 37208 ACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAA 37267 || |||||||||||||| || ||||| || ||||||| ||||| ||||| | |||||| Sbjct 647684 ACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAA 647625 Query 37268 TATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACG 37327 || | ||||| || ||||| ||||| |||||||| || || ||||| || || | | Sbjct 647624 GATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAATCT 647565 Query 37328 TGTACCGAAAGTTGAACTATAATC---AGAAATCCAtttttttGTCCAATCTGCCTTTAA 37384 | |||| | | | || || |||||| | | | ||| || |||||| Sbjct 647564 TTCGGCGAA---TAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGTCAGCCTTTTC 647508 Query 37385 TTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGT 37444 || | || ||| || ||||| || || || | |||| || | ||| | Sbjct 647507 CTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTT 647448 Query 37445 TATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTG 37504 | ||| || || || | ||| || |||||||||| || ||||| || ||||| Sbjct 647447 AACATAGGTGTCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTG 647388 Query 37505 AAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAA 37564 ||||| || |||||| | ||||| | | ||| || ||| | |||| | | | | || Sbjct 647387 GAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAA 647328 Query 37565 GTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATG 37624 ||| || ||||| || || || |||||||||||||| | ||| | || ||| Sbjct 647327 GTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAA 647268 Query 37625 TCTTTC---ATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 37681 |||||| |||||| || || ||||| |||| | |||| ||||||||||||| ||| Sbjct 647267 TCTTTCGCTTTCATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTC 647208 Query 37682 ATCAACGGTCCAAAAA 37697 || | ||||| ||| Sbjct 647207 TTCTGCAGTCCAGAAA 647192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316563073280