Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 3e-22
seq2 111 1e-19
>seq1
Length=3681944
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 28552 AAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTT 28611
|||||||||| || || ||||| ||||| ||||| ||||| || || ||| | |
Sbjct 1219340 AAATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCT 1219281
Query 28612 CAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671
|||| || | | | || ||||| || ||| ||||| || || | || ||||
Sbjct 1219280 CAGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATC 1219221
Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731
|||| ||| | |||||||| || || |||||||||||| || ||| | | || || |
Sbjct 1219220 AACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTACA 1219161
Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|||||||||| ||||| || ||||| | || ||||||||| |||| ||
Sbjct 1219160 ACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 1219112
>seq2
Length=3419278
Score = 111 bits (122), Expect = 1e-19
Identities = 168/239 (70%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 28548 GTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAA 28607
|| || |||||||| || || ||||| ||||| ||||| ||||| || || |||
Sbjct 1617324 GTCAAGATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAA 1617265
Query 28608 CCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTA 28667
| || || || | | | | | ||| ||| ||| || || || || | ||
Sbjct 1617264 TCATCCGACACTATTGACAACGTTAAGTCAAAGATCCAAGATAAGGAAGGTATCCCACCT 1617205
Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727
|||||||||||| | |||||||| || || ||||| |||||| || |||| | ||||
Sbjct 1617204 GATCAACAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGAC 1617145
Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
|| ||||| ||||| ||||| ||| | ||| |||| || |||||| |||| || || ||
Sbjct 1617144 TACAACATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATTAAGAGGTGGTATTAT 1617086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404634092128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |