Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq5 241 7e-59
seq1 214 9e-51
>seq5
Length=1013952
Score = 241 bits (266), Expect = 7e-59
Identities = 341/474 (72%), Gaps = 4/474 (1%)
Strand=Plus/Plus
Query 25896 AGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACA 25955
|||||||| ||| | |||||| ||||||||| ||| |||||| |||||||||||||| |
Sbjct 377928 AGAATAAAGTCCATTGAGCATTCTGCTCAACTCTCTTCATAAACAAATCTGGAATCCATA 377987
Query 25956 TTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTA 26015
|| |||| |||||| ||||| || ||||| || |||||||||||| | | ||| |
Sbjct 377988 AGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCCTTACCGTGATTCTTTCTAATATCGA 378047
Query 26016 AGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTT 26075
||||||||| ||||| || ||||||||||| | || | ||| ||| |||| |||||
Sbjct 378048 TGAAATCAAAGATATCAGAATGCCATGGTTCAATGTATAAAGCGAAAGCACCTGGTCTTT 378107
Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135
| || || || || || ||||||||||| | ||||||||| | | |||||||| |
Sbjct 378108 TGTTACCCCCCTGGTCAACATATCTTGCAGTGTTGTTGAAAACTCTAATCATTGGAA-TG 378166
Query 26136 ATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGA 26194
|| | ||| ||| || || || | ||| | || || || |||||||| | |||
Sbjct 378167 ATACCGTTAGAAGTACCATTAGTACCGGCAATATATGAACCAGTAGATCTAATGTTATGA 378226
Query 26195 GCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAAT-CTGAAACTGTATC 26253
|| | ||| || |||||||| || ||||| ||||| | || || |||||
Sbjct 378227 ATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAAAGCACATTGCTTCAA-AGTATC 378285
Query 26254 GAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGA 26313
|||| || | || ||| ||||||| | | |||||| || ||||| | ||| |
Sbjct 378286 ATAAATACCATCGATAGAATCGTCTTTCATAGCAACTAAAAAGCATGAAGACATTTGTGC 378345
Query 26314 ATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTC 26367
|||| || || | |||||||||||| |||| ||| |||||| | |||| |||
Sbjct 378346 GTGAGGAGTACCAGCATTAAATAATGTTGGTGAAGCGTGAGTAAAGTATCTTTC 378399
>seq1
Length=3681944
Score = 214 bits (236), Expect = 9e-51
Identities = 338/473 (71%), Gaps = 16/473 (3%)
Strand=Plus/Plus
Query 25898 AATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957
|| ||| |||||| |||| | ||||| |||||||| |||||||| || ||||| | |
Sbjct 1060456 AACAAACACCAATCTTCATTATTTTCAACCTTCTCCATGAATAAATCAGGTATCCAAAGT 1060515
Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017
| |||||||||||| | |||||| |||| |||||||||||||| || ||| |||||
Sbjct 1060516 GAATAAAATAAATCACGGGCTCTCTTTTCCTCTTTTCCGTGATTTTTCCTTAAGTCTAAA 1060575
Query 26018 AAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAAC-TACCTTTTCTTTT 26076
|| ||||||||||| |||||||| |||||||| || ||| || ||| ||| ||||||
Sbjct 1060576 AATTCAAAAATATCAGAGTGCCAAGGTTCTAAGTATATA-CAGAACGCACCCGGTCTTTT 1060634
Query 26077 TCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAA 26136
||||||||| || || ||| | ||||| || || |||| ||||||||||||||
Sbjct 1060635 ATTTCCACCTTGGTCAACATATTTGGCAGTGCTGTTAAACACTTGTAACATTGGAACTAA 1060694
Query 26137 TCCAGTTGAAAATCCGTTTGTGCTATGA-ATCTTGGATCCTGTCGATCTAATATCGTGAG 26195
|| | || |||||||| | ||| || | |||| ||||| || | |
Sbjct 1060695 CCCGCTCGAGGTACCGTTTGTAC-CTGAGATATAACTGCCTGAAGATCTGATGTTTGAAA 1060753
Query 26196 CATGAATACCGATTCCACCAGCCCATTTTGAAAT---AGCTGCACAATCTGAAACTGTAT 26252
|||| ||||| |||||||| ||| ||| || || ||||| || | || ||| || |
Sbjct 1060754 CATGCATACCAATTCCACCTGCCGCTTTCGAGATTAAAGCTG-AC-TTGTG-AACAGTTT 1060810
Query 26253 CGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCG 26312
||| ||| | | |||| ||| |||| |||| ||| ||| || || || || || |
Sbjct 1060811 TGAATATTTCATCTATGGAATCGCCTTCCATTGCTAGTAAGAAGCATGATGACAAAT--- 1060867
Query 26313 AATGAGT---TGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
|| | || ||| || ||| ||||| || || | |||||| || |||||
Sbjct 1060868 AAGGGGTCTCTGTGCCGCTATTGAATAAAGTGGGAGATGCATGAATAAAATAT 1060920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039901314400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |