Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 241 7e-59 seq1 214 9e-51 >seq5 Length=1013952 Score = 241 bits (266), Expect = 7e-59 Identities = 341/474 (72%), Gaps = 4/474 (1%) Strand=Plus/Plus Query 25896 AGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACA 25955 |||||||| ||| | |||||| ||||||||| ||| |||||| |||||||||||||| | Sbjct 377928 AGAATAAAGTCCATTGAGCATTCTGCTCAACTCTCTTCATAAACAAATCTGGAATCCATA 377987 Query 25956 TTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTA 26015 || |||| |||||| ||||| || ||||| || |||||||||||| | | ||| | Sbjct 377988 AGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCCTTACCGTGATTCTTTCTAATATCGA 378047 Query 26016 AGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTT 26075 ||||||||| ||||| || ||||||||||| | || | ||| ||| |||| ||||| Sbjct 378048 TGAAATCAAAGATATCAGAATGCCATGGTTCAATGTATAAAGCGAAAGCACCTGGTCTTT 378107 Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135 | || || || || || ||||||||||| | ||||||||| | | |||||||| | Sbjct 378108 TGTTACCCCCCTGGTCAACATATCTTGCAGTGTTGTTGAAAACTCTAATCATTGGAA-TG 378166 Query 26136 ATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGA 26194 || | ||| ||| || || || | ||| | || || || |||||||| | ||| Sbjct 378167 ATACCGTTAGAAGTACCATTAGTACCGGCAATATATGAACCAGTAGATCTAATGTTATGA 378226 Query 26195 GCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAAT-CTGAAACTGTATC 26253 || | ||| || |||||||| || ||||| ||||| | || || ||||| Sbjct 378227 ATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAAAGCACATTGCTTCAA-AGTATC 378285 Query 26254 GAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGA 26313 |||| || | || ||| ||||||| | | |||||| || ||||| | ||| | Sbjct 378286 ATAAATACCATCGATAGAATCGTCTTTCATAGCAACTAAAAAGCATGAAGACATTTGTGC 378345 Query 26314 ATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTC 26367 |||| || || | |||||||||||| |||| ||| |||||| | |||| ||| Sbjct 378346 GTGAGGAGTACCAGCATTAAATAATGTTGGTGAAGCGTGAGTAAAGTATCTTTC 378399 >seq1 Length=3681944 Score = 214 bits (236), Expect = 9e-51 Identities = 338/473 (71%), Gaps = 16/473 (3%) Strand=Plus/Plus Query 25898 AATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957 || ||| |||||| |||| | ||||| |||||||| |||||||| || ||||| | | Sbjct 1060456 AACAAACACCAATCTTCATTATTTTCAACCTTCTCCATGAATAAATCAGGTATCCAAAGT 1060515 Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017 | |||||||||||| | |||||| |||| |||||||||||||| || ||| ||||| Sbjct 1060516 GAATAAAATAAATCACGGGCTCTCTTTTCCTCTTTTCCGTGATTTTTCCTTAAGTCTAAA 1060575 Query 26018 AAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAAC-TACCTTTTCTTTT 26076 || ||||||||||| |||||||| |||||||| || ||| || ||| ||| |||||| Sbjct 1060576 AATTCAAAAATATCAGAGTGCCAAGGTTCTAAGTATATA-CAGAACGCACCCGGTCTTTT 1060634 Query 26077 TCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAA 26136 ||||||||| || || ||| | ||||| || || |||| |||||||||||||| Sbjct 1060635 ATTTCCACCTTGGTCAACATATTTGGCAGTGCTGTTAAACACTTGTAACATTGGAACTAA 1060694 Query 26137 TCCAGTTGAAAATCCGTTTGTGCTATGA-ATCTTGGATCCTGTCGATCTAATATCGTGAG 26195 || | || |||||||| | ||| || | |||| ||||| || | | Sbjct 1060695 CCCGCTCGAGGTACCGTTTGTAC-CTGAGATATAACTGCCTGAAGATCTGATGTTTGAAA 1060753 Query 26196 CATGAATACCGATTCCACCAGCCCATTTTGAAAT---AGCTGCACAATCTGAAACTGTAT 26252 |||| ||||| |||||||| ||| ||| || || ||||| || | || ||| || | Sbjct 1060754 CATGCATACCAATTCCACCTGCCGCTTTCGAGATTAAAGCTG-AC-TTGTG-AACAGTTT 1060810 Query 26253 CGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCG 26312 ||| ||| | | |||| ||| |||| |||| ||| ||| || || || || || | Sbjct 1060811 TGAATATTTCATCTATGGAATCGCCTTCCATTGCTAGTAAGAAGCATGATGACAAAT--- 1060867 Query 26313 AATGAGT---TGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 || | || ||| || ||| ||||| || || | |||||| || ||||| Sbjct 1060868 AAGGGGTCTCTGTGCCGCTATTGAATAAAGTGGGAGATGCATGAATAAAATAT 1060920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039901314400