Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 320 2e-82 seq1 98.7 1e-15 seq7 84.2 3e-11 >seq5 Length=1013952 Score = 320 bits (354), Expect = 2e-82 Identities = 1140/1750 (65%), Gaps = 49/1750 (3%) Strand=Plus/Minus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| |||||| || | | ||| | || | || || |||||||| || | |||| | Sbjct 378489 GAAAGACCACAGCACTTAGTTATGAGAGTTTCTATTGGTATCCACGGTGATAATATTGCT 378430 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 75325 ||| | || || || || | ||||| || | || | |||||| ||||||| Sbjct 378429 AAGGTCATAGAAACTTATAACTACATGTCAGAAAGATACTTTACTCACGCTTCACCAACA 378370 Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385 | || ||||||||||| || | || ||||| ||||| | | || | || Sbjct 378369 TTATTTAATGCTGGTACTCCTCACGCACAAATGTCTTCATGCTTTTTAGTTGCTATGAAA 378310 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 || || || ||| | ||||| |||| ||| | | | | ||||| || || ||| Sbjct 378309 GACGATTCTATCGATGGTATTTATGATACTTTGAAGCAATGTGCTTTGATTTCCAAGACT 378250 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 ||||| |||||||| | ||||| ||| | | ||| | | | || |||| || Sbjct 378249 GCTGGTGGTATTGGTTTACACATTCATAACATTAGATCTACTGGTTCATATATTGCCGGT 378190 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || |||||| || | ||||| ||||||||| || | || || ||| ||| || | Sbjct 378189 ACTAATGGTACTTCTAACGGTATCATTCCAATGATTAGAGTTTTCAACAACACTGCAAGA 378130 Query 75566 TATGTAAATCAAGCGGGGCGTCGCAAGG---GGTCCAT-CGCGGTCTACTTGGAACCATG 75621 ||||| | || | |||| | ||| ||| | | ||| | ||| | |||||||| Sbjct 378129 TATGTTGACCAGG-GGGGTAACAAAAGACCAGGTGCTTTCGCTTTATACATTGAACCATG 378071 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 |||| | |||||| | || ||| | || | || || || ||| | |||||| || Sbjct 378070 GCATTCTGATATCTTTGATTTCATCGATATTAGAAAGAATCACGGTAAGGAAGAGA-TCA 378012 Query 75682 GTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 | | ||||||||| || | || | ||||||||||| | || |||||| | |||||| Sbjct 378011 GAGCTAGAGATCTATTCCCGGCCTTATGGATTCCAGATTTGTTTATGAAGAGAGTTGAGC 377952 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || || ||||||| || | |||| || | | || || ||| | ||| | Sbjct 377951 AGAATGCTCAATGGACTTTATTCTCCCCTTCCGAAGCCCCTGGTTTACACGAACTTTACG 377892 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860 |||| || |||||||| | || || || |||||||| || || |||| | |||| Sbjct 377891 GTGATGAATTTGAAGCTTTATATACCAAATATGAAGAAGAAGGCAGAGGTAGACAAACTG 377832 Query 75861 TACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919 | | || | | | | | ||| | |||||| | || |||| ||||| || || || ||| Sbjct 377831 T-CAAGGCTCAAAAGCTATGGTATGCTATTTTAGAAGCACAAACGGAAACAGGCACTCCA 377773 Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979 | |||| | ||||||||||||||||| | || ||||||||||| ||||| || || Sbjct 377772 TTTATGTTATACAAGGATGCTTGTAATGAAAAATCCAACCAAAAGAACTTGGGTACTATT 377713 Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG--GCTG 76037 ||| || || | ||| |||||| | || || | | | | ||| | || | Sbjct 377712 AAGTCATCTAACTTGTGCTGTGAAATTGTTGAATATTC--CTCACCAGAAGAAGTTGCCG 377655 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC-AAT--GA---AGAGACTCGCA 76091 | || || | || || | || | || | ||| ||| || |||| | Sbjct 377654 TCTGTAACCTAGCTTCCGTGGCTTTGCCTGCATTCGTCGAATCGGATTCAGAGTCATCAT 377595 Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 | | | | ||||||||| |||||| | || ||| ||||| | || || | ||| Sbjct 377594 GGTATAACTTTGAAAAACTGCATGAAGTTACTAAGGTTGTTGCTAAGAACTTGAACATGA 377535 Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 ||||||||||||| | ||| || ||||| || ||| ||||| ||| | |||||| Sbjct 377534 TCATTGACAGAAACTATTACCCTGTTGAAGAGGCTAGAACATCTAACATGAAAAACAGAC 377475 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT---TTTGTGCCGCTACGCAT 76268 | |||| | | |||||||||||| | || || || || || ||| | ||| ||| Sbjct 377474 CAATTGCTGTTGGTGTTCAAGGTTTGGCTGACGTTTTCATGCAATTGAG--ATTAC-CAT 377418 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 ||||||| || |||| ||| |||| || || |||||||||||||| || || Sbjct 377417 TTGATTCCCCAGAGGCCAGGGACTTGAACATTCAAATTTTTGAAACCATGTACCATGCTG 377358 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGC--CCAAGGTTCCTATGAGACATTTGAGGG 76386 | | || || ||||||| | || | | || | ||||||| || | || Sbjct 377357 CTTTAGAAGCTTCGATTGAATTG--TCAATCTTAGATGGGCCATATGAGAATTTCCAAGG 377300 Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGA--TATGTGGGAAGGTGAAACCAAGCTC 76444 |||||| || || ||||| | | || || || |||| || || ||| |||| || Sbjct 377299 TTCTCCAGCTTCTCAAGGTCTATTACAATTCGACTTATGGGGTAA---GAAGCCAA-CTG 377244 Query 76445 AACTA--CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 76502 | || || |||||| | | |||||| | || || | ||| | | ||| | Sbjct 377243 ATTTATGGGATTGGGATCTATTAAAGGAAAGAATTTCCAAGCACGGTTTGAGAAACTCTT 377184 Query 76503 TTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 76562 | ||| |||| |||||||| || || || || ||||||| |||||| | || || |||| Sbjct 377183 TATTGCTGGCTCCAATGCCTACTGCTTCAACTTCACAAATTTTGGGTTACAACGAGTGCT 377124 Query 76563 TTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTG 76622 | ||||||||||| | ||||| ||| |||||| || |||||||| || |||| Sbjct 377123 TCGAACCATACACTTCTAACATTTACTCAAGAAGAGTTCTAGCAGGTGAATTCCAAATTG 377064 Query 76623 TCAACAAGCACCTCGTCAATGACCTCAAGAAGATT--GGTCTCTGGTCCAAGGATATGAA 76680 ||||| || | | | || | || |||| ||||| ||| | | | |||||| Sbjct 377063 TCAAC--CCATATTTGCTAAGAGATTTAGTTGATTTAGGTCTATGGAGCGATGCTATGAA 377006 Query 76681 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATAT 76740 | || |||| | ||| ||| || |||||||| | | | || ||||| || | Sbjct 377005 GAATTTCATCATTCAAGATAATGGCTCTATTCAAAACTTACCGAACATTCCAGACGAATT 376946 Query 76741 CAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGA-TGTCATTGACATGGCCG 76799 ||||| | ||| ||||| |||||||| | ||||| | ||||| ||||| | Sbjct 376945 AAAGAAATTATACAAGACAGTCTGGGAAAT-TTCACAAAAGAGCATTATTGATATGGCTG 376887 Query 76800 CAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAG--TC 76856 | ||| | ||| |||| |||||||||| |||| ||||| ||||| |||| | Sbjct 376886 CTGATAGAGGT-GCTTACATTGATCAATCTCAATCAATGAA--CATTCACTTAAAGAACC 376830 Query 76857 CAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCG 76916 |||| ||| ||| | | || ||||| | |||| ||||| |||| | || || | Sbjct 376829 CAACTATGGGTAAGTTAACGTCCATGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACTG 376770 Query 76917 GAATGTACTA 76926 | |||||||| Sbjct 376769 GTATGTACTA 376760 Score = 113 bits (124), Expect = 5e-20 Identities = 346/527 (66%), Gaps = 21/527 (4%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 |||||||| |||||| ||||||| || || ||| | | |||||||| | | | ||| Sbjct 647196 TGGACTGCAGAAGAAATTGATTTATCAAAGGATACTCATGACTGGAACAACAGATTAAAT 647255 Query 64771 GAAAATGAAAAGAAATTCATA--AAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAA 64828 |||| |||| ||||| ||| | | || |||||||| | ||||| || | Sbjct 647256 GAAAGCGAAAGATTTTTCATTTCAAGAGTTT--TAGCTTTCTTTGCAGCCTCCGACGGTA 647313 Query 64829 TTGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCT 64888 ||||| ||||| | | | || ||| | | ||||| || || ||||| | Sbjct 647314 TTGTTAACGAGAACTTGGTTGAAAACTTTTCTGCCGAAGTCCAAATTCCAGAAGCCAAGT 647373 Query 64889 CATTCTACGCATATCAATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAATTG 64947 ||||||| | || | ||| ||| ||| | || ||||| || ||| |||| Sbjct 647374 GTTTCTACGGTT-TCCAGATCATGATGGAAAACATCCACTCTGAAACTTACTCATTATTG 647432 Query 64948 ATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAG-----TTATTTGAAGCCATCC 65002 || |||| || |||||||| | || || || | ||||| | || || Sbjct 647433 ATCGACACCTATGTTAAGGATCCA-----AAGGAGGCTGACTTCTTATTCAATGCTATTG 647487 Query 65003 AAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGT 65062 | ||| | || || || || | ||||| | ||||| |||| |||| | ||| | Sbjct 647488 AGACTATTCCTTGCATCAAGGAAAAGGCTGACTGGGCCATGAGATGGATGAACAACGAAA 647547 Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122 | ||| |||||||| | | |||| ||||| ||| || |||||||||||||| | Sbjct 647548 ATGGCTTATTCGCCGAAAGATTAGTTGCCTTTGCTGCTGTCGAAGGTATCTTCTTCTCTG 647607 Query 65123 GGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTC 65181 | ||||| ||| |||| | ||||||||| ||| | || || ||||| ||| || ||| Sbjct 647608 GTTCATT-TGCTTCTATCTTTTGGTTGAAAAAGAGAGGCCTAATGCCGGGCTTAACTTTC 647666 Query 65182 TCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || |||||| | |||| ||||||| ||| | ||| || ||||| Sbjct 647667 TCTAATGAATTGATTTGTAGAGATGAAGGTTTACACACTGATTTTGC 647713 >seq1 Length=3681944 Score = 98.7 bits (108), Expect = 1e-15 Identities = 219/320 (68%), Gaps = 9/320 (3%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || || ||||| || |||| ||| || | | ||| |||||||| || ||||| || Sbjct 2806099 GGCGCTAAGATTCCGAGAGGTGCCATTTTATCAGGTCCTCCAGGTACCGGTAAGACTCTG 2806040 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394 | ||| ||| | || ||||| | |||| |||||| || | || |||| | | Sbjct 2806039 TTAGCCAAAGCAACTGCTGGTGAGGCTGATGTTCCATTCTATTCTGTT-TCTGGTTCTGA 2805981 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 ||||| || |||||||||||||| ||||| || ||||| || | || || | || Sbjct 2805980 ATTTGTTGAAATGTTTGTTGGTGTTGGTGCTTCTAGAGTTCGTGAATTGTTCAAAGTTGC 2805921 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG-CAA- 175512 | | |||||| || | |||| |||| |||||||||||||||| | || ||| ||| Sbjct 2805920 CAGAGAAAATGCTCCTTCTATTATCTTTGTTGATGAGATTGATGCCATCGGAAAGTCAAG 2805861 Query 175513 --CGCAGCGCTGGTGGT-ATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTA 175569 | || | | | ||| || || ||||| || |||||| | ||| | |||||| || Sbjct 2805860 ATCTAAG-GGTAGAGGTGCTGGAAG-TAATGATGAAAGAGAAAACACATTGAATCAATTA 2805803 Query 175570 CTCACCGAGATGGATGGCTT 175589 || ||| ||||| || || Sbjct 2805802 CTAGTCGAAATGGACGGTTT 2805783 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || || ||||| ||||||| |||| || | || || ||||| || ||| |||| Sbjct 1060322 TCCCAAACGGAAACTGGAAATCCATTCTTGTTGTATAAAGATGCCTGCAACGTGAAGTCG 1060263 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 || |||||||||||||| ||||| || ||||| | ||| |||||| | || || Sbjct 1060262 AATCAAAAGAATTTGGGTACAATTAAATCATCAAACTTATGCTGTGAAATTGTTGAATAT 1060203 Query 76016 ACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAAT 76056 || || ||||| || |||||||| ||||||||||| || Sbjct 1060202 TCATCGAAAGATGAAACAGCTGTTTGTAATTTGGCATCGAT 1060162 >seq7 Length=781880 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27898 ACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCG 27957 ||||| || || |||||| ||| ||||| | || | || | || ||| | || ||| Sbjct 265397 ACCTCGAAATCCTTGTCTGAGTGGTTGAATAAAATAATCTTAATCTCGCCTCTGTAATCG 265456 Query 27958 GGATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGT 28017 | ||||||||||| |||||| |||||||||||| |||| ||||| |||| |||| Sbjct 265457 GCGTCAATAACACCAGCACCAGTGGAAATACCATGCTTTGCAGCAAGACCAGATCTTGGT 265516 Query 28018 GCAACACGACCATA 28031 ||||| | ||| || Sbjct 265517 GCAACTCTACCGTA 265530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569361372160