Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq5 217 3e-51
seq2 178 3e-39
seq1 170 4e-37
seq9 159 7e-34
>seq5
Length=1013952
Score = 217 bits (240), Expect = 3e-51
Identities = 528/801 (66%), Gaps = 16/801 (2%)
Strand=Plus/Minus
Query 49645 ATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCA 49704
||||||||||||| || ||||| ||||| ||||| |||| ||||| ||||||||||
Sbjct 647892 ATAATAATCTATCAGCAACAAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCA 647833
Query 49705 ATAATTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgttta 49763
||||| | ||||||| ||||| | || | |||||| | || || || |||| ||
Sbjct 647832 ATAATGCACATGGTAAGGCATCCGTGAAGTATCTCTTTT-CAATGTCAACTGCTTCAGTA 647774
Query 49764 attatcataattatattattttttgataatt----tatatttaatatgattcgcatatat 49819
|| ||| | | | | |||| || || || | | || || ||| | |||
Sbjct 647773 ATAATCTTGACAACA--ATTTCTTCAT--TTGGAGTGTTGTTCATGTGA---GAGAATAA 647721
Query 49820 taaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGT 49879
|||||| ||||||||||| |||||||| || || ||| | || ||||||||| |||||
Sbjct 647720 TAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGT 647661
Query 49880 TAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAA 49939
||| || ||||||| ||||||||||| | |||||| || || ||||| || ||| ||
Sbjct 647660 TAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAA 647601
Query 49940 GAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATC 49999
||| ||||| |||||| ||||| || | || |||| | | || | || || |
Sbjct 647600 GAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTT 647541
Query 50000 TAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGC 50059
||||| | || ||||| || || |||| ||||| |||| ||| | || |||||
Sbjct 647540 GTTCATCCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGC 647481
Query 50060 TTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATA 50119
|| ||||| | || | || ||||| || ||
Sbjct 647480 ATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATCAATAATGAGTA 647421
Query 50120 CATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGA 50179
||||||| || | |||||| || || || || || | |||||||
Sbjct 647420 AGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGG 647361
Query 50180 ATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGC 50239
| || ||||||| | | || |||||| || ||||| |||||||| || || ||
Sbjct 647360 AATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGC 647301
Query 50240 TGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTC 50296
||| ||||| |||||||| | ||| ||| | |||| | || ||||| || |
Sbjct 647300 TGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTT 647241
Query 50297 CCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGA 50356
||| | | ||| ||||||||||| | ||||||| ||||| || || ||| | |
Sbjct 647240 CCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGC 647181
Query 50357 TTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTAGT 50416
|| || |||||||| | || ||| | || ||| || || | ||| ||| ||| |
Sbjct 647180 CTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAAAACAAATCTTTTTTT 647121
Query 50417 AtttttttCTAATATCGGTTC 50437
|||| || ||||| ||| ||
Sbjct 647120 GTTTTCTTGTAATAACGGCTC 647100
>seq2
Length=3419278
Score = 178 bits (196), Expect = 3e-39
Identities = 184/241 (76%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||||||||||||| | | || || || |||||||| | || || ||| |
Sbjct 1617081 GTTCAATAATACCACCTCTTAATCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGT 1617140
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || || ||||| |||| |||| || ||||| |||||||||||||||||||||||||
Sbjct 1617141 TGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTT 1617200
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
|||||||||| || ||||| |||||||| || || || || || |||| || |
Sbjct 1617201 GATCAGGTGGGATACCTTCCTTATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGG 1617260
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
| ||||| || |||| ||| ||||| ||||||||||| ||||||| || || ||||| |
Sbjct 1617261 ATGATTCGACCTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATCT 1617320
Query 192539 T 192539
|
Sbjct 1617321 T 1617321
>seq1
Length=3681944
Score = 170 bits (188), Expect = 4e-37
Identities = 178/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
||||||||| | | ||| ||||| || || || | || ||| || || || || ||||
Sbjct 1219111 ACCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGA-ATGTTGTAGTCAG 1219169
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
|||| |||| |||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1219170 ATAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTG 1219229
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || ||||| || ||||| || || || ||||| || | ||||| ||||| |
Sbjct 1219230 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGA 1219289
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
| |||| ||| ||||| ||||||||||| ||||||| || || |||||||
Sbjct 1219290 CCTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATTT 1219340
>seq9
Length=470967
Score = 159 bits (176), Expect = 7e-34
Identities = 139/173 (80%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||||||||| | || || |||||||||||||||||||||||||| ||||||||||||
Sbjct 292340 GATAATGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGT 292399
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| ||||| || |||||| |||| ||| || |||||
Sbjct 292400 GGAATACCTTCCTTATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCA 292459
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| |||| || ||||| ||||||||||| ||||||| || || ||||| ||
Sbjct 292460 ACCTCTAAGGTGATGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCATGTT 292512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479596363200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |