Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq5 223 6e-53
seq2 168 1e-36
seq1 163 5e-35
seq9 154 3e-32
>seq5
Length=1013952
Score = 223 bits (246), Expect = 6e-53
Identities = 597/917 (65%), Gaps = 18/917 (2%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| || || ||| | ||||| || ||||| || || || |||| || ||
Sbjct 648007 TTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTT 647948
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATA-TAA 38950
| |||||| || ||||| || || || || | || | | | | | | | ||| |||
Sbjct 647947 TCCATAAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTCT-TGCAACCTAAAGATAATAA 647889
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||||||| || ||||| ||||| ||||| |||| ||||| ||||||||||||||
Sbjct 647888 TAATCTATCAGCAACAAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAA 647829
Query 39011 TTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaatta 39069
| | ||||||| ||||| | || | |||||| | || || || |||| |||| |
Sbjct 647828 TGCACATGGTAAGGCATCCGTGAAGTATCTCTTTT-CAATGTCAACTGCTTCAGTAATAA 647770
Query 39070 tcataattatattattttttgataatt----tatatttaatatgattcgcatataGTAAA 39125
|| | | | | |||| || || || | | || || ||| | ||| ||||
Sbjct 647769 TCTTGACAACA--ATTTCTTCAT--TTGGAGTGTTGTTCATGTGA---GAGAATAATAAA 647717
Query 39126 CATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 39185
|| |||||||| || ||||||||||| || ||| | || ||||||||| ||||||||
Sbjct 647716 CAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAG 647657
Query 39186 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 39245
|| ||||||| ||||||||||| | |||||| || || ||||| || ||| |||||
Sbjct 647656 CCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAG 647597
Query 39246 ATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAA 39305
||||| || ||| ||||| || | || |||| | | || | || || |
Sbjct 647596 ATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTC 647537
Query 39306 ATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 39365
||||| | |||||||| || || |||| ||||| |||| ||| | || ||||| ||
Sbjct 647536 ATCCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTG 647477
Query 39366 AATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATT 39425
||||| | || || ||
Sbjct 647476 AATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATCAATAATGAGTAAGTT 647417
Query 39426 TCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATAC 39485
||||| || | |||||| || || || || || | | ||||||| |
Sbjct 647416 TCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATT 647357
Query 39486 TGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCG 39545
|| ||||||| | | || |||||| || ||||| |||||||| || || |||||
Sbjct 647356 TGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCA 647297
Query 39546 AAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTCCCAA 39602
||||| |||||||| | ||| ||| | |||| | || ||||| || | |||
Sbjct 647296 AAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTTCCAG 647237
Query 39603 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTT 39662
| | ||| ||||||||||| | ||||||| ||||| ||||| ||| | | ||
Sbjct 647236 TCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTC 647177
Query 39663 TTATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAttt 39722
|| |||||||| | || ||| | || ||| || || || ||| ||| ||| | |||
Sbjct 647176 TTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAAAACAAATCTTTTTTTGTTT 647117
Query 39723 ttttCTAATATCGGTTC 39739
| || ||||| ||| ||
Sbjct 647116 TCTTGTAATAACGGCTC 647100
>seq2
Length=3419278
Score = 168 bits (186), Expect = 1e-36
Identities = 179/236 (76%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|||||||||||||| | || || || || |||||||| | || || || || ||
Sbjct 1617086 ATAATACCACCTCTTAATCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAG 1617145
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| ||||||| || | || || ||||| ||||||||||| |||||||||||||| |||
Sbjct 1617146 TCGGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCA 1617205
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| |||||||| || || || || || ||||| || || |||
Sbjct 1617206 GGTGGGATACCTTCCTTATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGAT 1617265
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| || |||| ||| ||||| ||||||||||| ||||||| ||| || ||||| ||
Sbjct 1617266 TCGACCTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATCTT 1617321
>seq1
Length=3681944
Score = 163 bits (180), Expect = 5e-35
Identities = 179/238 (75%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || ||| ||||| || || || | || || ||| ||
Sbjct 1219103 TTCTTACCACCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTG 1219162
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || ||||| | || | || |||||||| ||||||||||| |||||||| |||||
Sbjct 1219163 TAGTCAGATAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGA 1219222
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || || || ||||| || || |||||
Sbjct 1219223 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAG 1219282
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT 172071
||||| || |||| ||| ||||| ||||||||||| ||||||| ||| || |||||||
Sbjct 1219283 GATTCGACCTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATTT 1219340
>seq9
Length=470967
Score = 154 bits (170), Expect = 3e-32
Identities = 138/173 (80%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || |||| || ||||||||||||||||| |||||||| ||||| ||||||
Sbjct 292340 GATAATGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGT 292399
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| ||||| || |||||| |||||||| || |||||
Sbjct 292400 GGAATACCTTCCTTATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCA 292459
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| |||| || ||||| ||||||||||| ||||||| ||| || ||||| ||
Sbjct 292460 ACCTCTAAGGTGATGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCATGTT 292512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135637945600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |