Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 seq1 123 2e-23 seq5 86.0 6e-12 >seq2 Length=3419278 Score = 123 bits (136), Expect = 2e-23 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || ||||||| |||| ||||| || || || | || || ||| | | Sbjct 1617319 GATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCATC 1617260 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||||| | || |||| ||| |||| ||||||||| || ||||| || || || |||| Sbjct 1617259 CGACACTATTGACAACGTTAAGTCAAA-GATCCAAGATAAGGAAGGTATCCCACCTGATC 1617201 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 |||| | || |||||||| || || || | || ||| |||| | || || || | Sbjct 1617200 AACAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACA 1617141 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 |||| ||||||||||| || |||||||||| ||| |||| Sbjct 1617140 ACATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATT 1617101 >seq1 Length=3681944 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| |||| ||||| || || || | || || ||| || | Sbjct 1219338 ATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCTCA 1219279 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || |||||| Sbjct 1219278 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1219219 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || |||||||| || || || |||| ||| |||| | | || || || ||| Sbjct 1219218 CAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTACAAC 1219159 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 |||||||||||||| || | ||||| || || |||| Sbjct 1219158 ATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATT 1219121 >seq5 Length=1013952 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 139084 GAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACAC 139143 || |||| ||| || || || ||||| || || | ||||| |||||||| ||| Sbjct 377639 GAAGCTAGGTTACAGACGGCAACTTCTTCTGGTGAGGAATATTCAACAATTTCACAGCAC 377698 Query 139144 AAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCT 139203 || ||| |||| || ||||| || || | ||| ||| |||| ||||||||||| Sbjct 377699 AAGTTAGATGACTTAATAGTACCCAAGTTCTTTTGGTTGGATTTTTCATTACAAGCATCC 377758 Query 139204 TTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT 139250 ||||| | |||| | || ||||| |||||| ||||| |||| ||| Sbjct 377759 TTGTATAACATAAATGGAGTGCCTGTTTCCGTTTGTGCTTCTAAAAT 377805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897420040960