Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-25 seq2 104 2e-17 >seq1 Length=3681944 Score = 129 bits (142), Expect = 5e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||| ||||||||||| || || | | ||| | | ||| || | ||| || ||| Sbjct 1219142 GTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCTTCCAATTGCTTACCA 1219201 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 ||| | || |||||||| ||||| || |||||||| || |||||||| | || ||| Sbjct 1219202 GCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTG 1219261 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769 ||| | || | ||||| || ||| || || | ||| || || || |||||||||||| Sbjct 1219262 ACATTGTCAATGGTGTCTGAGGATTCGACCTCTAAAGTGATGGTCTTACCAGTTAAGGTT 1219321 Query 29770 TTAACAAATATCTGCATTT 29788 ||||| || || ||||||| Sbjct 1219322 TTAACGAAAATTTGCATTT 1219340 >seq2 Length=3419278 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || | || ||||| || | || ||||| ||||| ||||| || || | Sbjct 1617092 CCACCTCTTAATCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGAT 1617151 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | || ||||| || ||||| || || Sbjct 1617152 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGG 1617211 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || || ||||| | ||| || || | || | |||||| || ||| || Sbjct 1617212 ATACCTTCCTTATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACC 1617271 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | ||| || || || ||||||||||||||||| || || ||||| || Sbjct 1617272 TCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATCTT 1617321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219049764512