Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq5 138 1e-27
>seq5
Length=1013952
Score = 138 bits (152), Expect = 1e-27
Identities = 298/438 (68%), Gaps = 17/438 (4%)
Strand=Plus/Plus
Query 50187 GACTTAATACTCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCA 50246
||||| || |||| ||| | || | |||||| || | |||||| || |||||
Sbjct 647466 GACTTCTTATTCAATGCTATTGAGACTATTCCTTGCATCAAGGAAAAGGCTGACTGGGCC 647525
Query 50247 TTGAAATGGACTaaaaacaaaaaa--CTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCA 50304
||| ||||| || ||| |||| |||| || |||||| | ||||| || |||||
Sbjct 647526 ATGAGATGGATGAACAACGAAAATGGCTTA--TTCGCCGAAAGATTAGTTGCCTTTGCTG 647583
Query 50305 TAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAG 50364
|| |||||| | || || || ||| ||||| | || |||| | |||| ||
Sbjct 647584 CTGTCGAAGGTATCTTCTTCTCTGGTTCATTTGCTTCTATCTTTTGGTTGAAAAAGAGAG 647643
Query 50365 GCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACA 50424
|| ||||||| ||| | || || || || ||||||| | || ||||| | ||||
Sbjct 647644 GCCTAATGCCGGGCTTAACTTTCTCTAATGAATTGATTTGTAGAGATGAAGGTTTACACA 647703
Query 50425 CAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATC-ATACGAAACA 50483
| || ||||| ||||| | || | | | | ||||| || || | | ||| |
Sbjct 647704 CTGATTTTGCTTGTTTATT-----ATTCTCTC--ACATGAACAACACTCCAAATGAAGAA 647756
Query 50484 ATTTTGGACATGTTCAAA---GAAGCCGTCGACATCGAAAAAGAGTTT-TTCACGGACGC 50539
||| | | || | | | ||||| || ||||| ||||| ||| | |||||||| ||
Sbjct 647757 ATTGTTGTCAAGATTATTACTGAAGCAGTTGACATTGAAAA-GAGATACTTCACGGATGC 647815
Query 50540 TTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGT 50599
||||| ||||| ||||| ||||||||||| |||||||| | ||| ||||||||||
Sbjct 647816 CTTACCATGTGCATTATTGGGTATGAACGCAGAATTGATGTGCCAATACGTTGAGTTTGT 647875
Query 50600 TGCAGACAGATTGTTGTT 50617
||| || ||||| || ||
Sbjct 647876 TGCTGATAGATTATTATT 647893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543804582400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |