Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2 161 2e-34 seq1 159 7e-34 seq9 145 1e-29 >seq2 Length=3419278 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | || || ||||| | ||| ||||| || || || || || || | Sbjct 1617090 TACCACCTCTTAATCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGG 1617149 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | ||||||| ||||||| ||| || ||||||||||||| ||| |||||||| || | Sbjct 1617150 ATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 1617209 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||| ||||||| || || || ||||| || || | ||| | Sbjct 1617210 GGATACCTTCCTTATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGA 1617269 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || ||||| || ||||| || || || || || || || || ||||| Sbjct 1617270 CCTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 1617318 >seq1 Length=3681944 Score = 159 bits (176), Expect = 7e-34 Identities = 175/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| || | | |||||||||| || ||||| || || || || || ||||| Sbjct 1219111 ACCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGA 1219170 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||||||| ||||| | ||| || ||||||||||||| |||||||||||| || || Sbjct 1219171 TAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 1219230 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTA 82761 || |||||||| ||||| ||||| | || ||||| ||||| || || | ||| ||| | Sbjct 1219231 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTC-TGAGGATTCGA 1219289 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | || ||||| || ||||| || || || || || || || || |||||| Sbjct 1219290 CCTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATT 1219339 >seq9 Length=470967 Score = 145 bits (160), Expect = 1e-29 Identities = 137/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707 ||||||||||||||| |||||| ||||||||||||| |||||||||||| || || || | Sbjct 292347 TTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATAC 292406 Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767 ||||||||||||| || || | || ||||| ||||| ||||| || ||| || || | Sbjct 292407 CTTCCTTATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCAACCTCTA 292466 Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTTTT 82822 | || || ||||| || || || || || || || || ||||| || ||| ||| Sbjct 292467 AGGTGATGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCATGTTTGTATGTTT 292521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826797450848