Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5 201 3e-46
seq1 136 9e-27
>seq5
Length=1013952
Score = 201 bits (222), Expect = 3e-46
Identities = 473/704 (67%), Gaps = 15/704 (2%)
Strand=Plus/Minus
Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524
|| ||| ||| | || || ||||||| || || ||| | | |||| || |||| ||
Sbjct 378388 TACTCACGCTTCACCAACATTATTTAATGCTGGTACTCCTCACGCACAAATGTCTTCATG 378329
Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584
|||| | | | || || || |||||||| || |||||||||||| || | || ||
Sbjct 378328 CTTTTTAGTTGCTATGAAAGACGATTCTATCGATGGTATTTATGATACTTTGAAGCAATG 378269
Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAA 110644
|||| | ||||| || | |||| || |||||| | ||| ||||| | ||| | || |
Sbjct 378268 TGCTTTGATTTCCAAGACTGCTGGTGGTATTGGTTTACACATTCATAACATTAGATCTAC 378209
Query 110645 AGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGT 110704
|| || |||| || | || ||| |||| | || | |||||||| | |||||
Sbjct 378208 TGGTTCATATATTGCCGGTACTAATGGTACTTCTAACGGTATCATTCCAATGATTAGAGT 378149
Query 110705 CTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGC 110761
|||||| ||||||||| |||||| | || || ||| || ||| || | || ||
Sbjct 378148 TTTCAACAACACTGCAAGATATGTTGACCAGGGGGGTAACAAAAGACCAGGTGCTTTCGC 378089
Query 110762 TATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCA 110821
| | || | ||||| |||||||| ||||| ||||| ||| | || || | || |||||
Sbjct 378088 TTTATACATTGAACCATGGCATTCTGATATCTTTGATTTCATCGATATTAGAAAGAATCA 378029
Query 110822 AGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATT 110881
|| ||||| ||||| | ||| |||| || | |||||| ||||||| ||
Sbjct 378028 CGGTAAGGAAGAGATCAGAGCTAGAGATCTATTCCCGGCCTTATGGATTCCAGATTTGTT 377969
Query 110882 CATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATC--GTTCTCCT 110939
||||| | ||| | | |||| ||| || |||| | ||| | || | |||
Sbjct 377968 TATGAAGAGAGTTGAGCAGAATGCTCAATGGACT-TTAT-TCTCCCCTTCCGAAGCCCCT 377911
Query 110940 GGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAA--AAATATGAAAAAG 110997
||| || || | || || | || ||||||| ||||| | ||||||||| |||
Sbjct 377910 GGTTTACACGAACTTTACGGTGATGAATTTGAAG--CTTTATATACCAAATATGAAGAAG 377853
Query 110998 AAGGCA-AGTTTCGCAAACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATC 111055
|||||| || | ||||| || | |||||| | || |||| || | ||| |
Sbjct 377852 AAGGCAGAGGTAGACAAAC--TGTCAAGGCTCAAAAGCTATGGTATGCTATTTTAGAAGC 377795
Query 111056 ACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAA 111115
|||| ||||| || ||||| | ||| || || || ||| | |||| ||||| ||
Sbjct 377794 ACAAACGGAAACAGGCACTCCATTTATGTTATACAAGGATGCTTGTAATGAAAAATCCAA 377735
Query 111116 TCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|||| ||| || || || |||||||| ||| ||||||||||
Sbjct 377734 CCAAAAGAACTTGGGTACTATTAAGTCATCTAACTTGTGCTGTG 377691
Score = 86.0 bits (94), Expect = 1e-11
Identities = 374/582 (64%), Gaps = 15/582 (3%)
Strand=Plus/Plus
Query 131435 TTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCTGG 131494
|| ||||||||| | || || | | | ||||| ||||| ||| || | ||||||
Sbjct 647139 TTCCCAATTAAATACCATGAAATCTGGCAAATGTACAAGAAGGCTGAAGCTTCTTTCTGG 647198
Query 131495 ACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAA---ATTAACCTTG 131551
|||| ||||| || ||| | | || |||| | |||| ||| | || ||||| ||
Sbjct 647199 ACTGCAGAAGAAATTGATTTATCAAAGGATACTCATGACTGGAACAACAGATTAAA--TG 647256
Query 131552 AATGAAAAAGATTTTG--TTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCATTG 131609
|| | ||||||||| |||| | |||| | || ||||| || | || || ||||
Sbjct 647257 AAAGCGAAAGATTTTTCATTTCAAGAGTTTTAGCTTTCTTTGCAGCCTCCGACGGTATTG 647316
Query 131610 TTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAACATCGT 131669
||| || || | ||| || || | ||| | | ||||| |||| | | |
Sbjct 647317 TTAACGAGAACTTGGTTGAAAACTTTTCTGCCGAAGTCCAAATTCCAGAAGCCAAGTGTT 647376
Query 131670 TCTACACATTTCAAGCCGCTGTTG-AATCTATTCATAGCGAGATGTATTCATTATTGATT 131728
||||| |||| || || || || || || || | || |||||||||||
Sbjct 647377 TCTACGG-TTTCCAGATCATGATGGAAAACATCCACTCTGAAACTTACTCATTATTGATC 647435
Query 131729 GAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAATTT 131788
|| | |||||| || | | || | ||||| ||||| | | | ||
Sbjct 647436 GACACCTATGTTAAGGATCCAAAGGAGGCTGACTTCTTATTCAATGCTATTGAGACTATT 647495
Query 131789 CCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATT--CAA-GATGATTCCGCT 131845
||| || || | || || || ||||| || | |||||| ||| || || |||
Sbjct 647496 CCTTGCATCAAGGAAAAGGCTGACTGGGCCATGAGATGGATGAACAACGAAAATG--GCT 647553
Query 131846 AATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCT 131905
||| | | |||| | || || |||||| ||| |||||||| ||||| || ||| |
Sbjct 647554 TATTCGCCGA-AAGATTAGTTGCCTTTGCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCA 647612
Query 131906 TTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAAT 131965
|| | ||||||||||| | || ||| | || | ||||| || | | || || |||
Sbjct 647613 TTTGCTTCTATCTTTTGGTTGAAAAAGAGAGGCCTAATGCCGGGCTTAACTTTCTCTAAT 647672
Query 131966 CAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCT 132007
|||| || | |||||||||| || || ||||| ||||||
Sbjct 647673 GAATTGATTTGTAGAGATGAAGGTTTACACACTGATTTTGCT 647714
>seq1
Length=3681944
Score = 136 bits (150), Expect = 9e-27
Identities = 320/477 (67%), Gaps = 7/477 (1%)
Strand=Plus/Minus
Query 110688 GTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAG 110744
|||||||||||| ||| || ||| |||||| |||||||| | |||||||| |||
Sbjct 1060691 GTTCCAATGTTACAAGTGTTTAACAGCACTGCCAAATATGTTGACCAAGGTGGAAATAAA 1060632
Query 110745 AGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTA 110804
||| || | || ||| || | ||||||||||| || ||||| |||||||| |||
Sbjct 1060631 AGACCGGGTGCGTTCTGTATATACTTAGAACCTTGGCACTCTGATATTTTTGAATTTTTA 1060572
Query 110805 GAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATG 110864
|| | | |||||||| ||| || ||| | ||||| ||||||||||||||| || |
Sbjct 1060571 GACTTAAGGAAAAATCACGGAAAAGAGGAAAAGAGAGCCCGTGATTTATTTTATTCACTT 1060512
Query 110865 TGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGT 110924
||||| | |||||||||||| | ||| || | |||| |||| | | | |
Sbjct 1060511 TGGATACCTGATTTATTCATGGAGAAGGTTGAAAATAATGAAGATTGGTGTTTGTTTTCG 1060452
Query 110925 CCTCAT-CGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGA 110983
|| ||| | ||||| || ||| ||||| |||| || | | | | || ||
Sbjct 1060451 GAAGATACGTGC-CCTGGATTAAGCGATTGCTATGGGGAAGAATTCGTAAAATTATATGA 1060393
Query 110984 AAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAA-TTCCAGCTCAAGAACTTTGGTTCA 111042
|||||| || | ||| ||| | || || ||| | ||| ||| || | ||| |
Sbjct 1060392 AAAATACGAGACTGAA-AAAAGATACGTTAAGAAAGTGAAAGCCCAAAAATTATGGCACT 1060334
Query 111043 AAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTA 111102
|| | | || ||| |||||||||| ||| | | |||||||||||| |
Sbjct 1060333 CTATATTGGTTTCCCAAACGGAAACTGGAAATCCATTCTTGTTGTATAAAGATGCCTGCA 1060274
Query 111103 ATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
| || || ||||||| |||||| || |||||||| || || || |||||||
Sbjct 1060273 ACGTGAAGTCGAATCAAAAGAATTTGGGTACAATTAAATCATCAAACTTATGCTGTG 1060217
Score = 125 bits (138), Expect = 2e-23
Identities = 162/220 (74%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368
||||||| || |||| ||| | || ||| | ||||| ||||| |||||||||||
Sbjct 344602 CATTTGATGGATGATGACCCGGTGTTATTTAATCGTCAACCCTCACTTCATAAAATGTCC 344543
Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTGACATTTC-GATTAAATGTAAGTG 305426
||||||||||||| ||||||||| ||| | ||| | ||| || | ||| || |
Sbjct 344542 ATGATGGCTCATAGAGTCAAAGT--TATGCCATATTCAACGTTCAGAATGAATCTATCAG 344485
Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486
| | | ||||||||||| ||||||||||| |||||||||||| | ||||| || ||||
Sbjct 344484 TTACTTCTCCTTATAATGCTGATTTTGATGGTGATGAAATGAATTTACATGTTCCCCAAT 344425
Query 305487 CAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGT 305526
| | | || | |||||||||| |||| ||| ||||
Sbjct 344424 CGTACGAAACTAGAGCTGAATTATCCCAAATTTGTGCTGT 344385
Score = 95.1 bits (104), Expect = 3e-14
Identities = 147/205 (72%), Gaps = 5/205 (2%)
Strand=Plus/Minus
Query 305284 TGAA-ATTAATGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATA 305342
|||| ||| |||||||||| ||||| | | || |||| ||| | |||||||
Sbjct 151463 TGAACATTGGTGATATTGTTGAAAGACACATTGAGGATGGTGATATAGTTTTATTCAATA 151404
Query 305343 GGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTAT--CTGG 305400
| ||||| || |||||| | | ||||| || | ||| | ||||| |||| || |
Sbjct 151403 GACAACCTTCGTTGCATAGACTATCTATTCTGTCGCATTTTG-CAAAG-ATTAGACCTTG 151346
Query 305401 ATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGA 305460
|| || |||| || | | ||| |||||| ||||||||||| ||||| ||||| ||
Sbjct 151345 GAGAACCTTCAGATTGAACGAATGTGTTTGTACCCCTTATAATGCCGATTTCGATGGTGA 151286
Query 305461 TGAAATGAATATGCATGTACCTCAA 305485
|||||||||| | ||||| ||||||
Sbjct 151285 TGAAATGAATCTACATGTTCCTCAA 151261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812313406752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |