Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5 423 3e-113 seq1 122 1e-22 >seq5 Length=1013952 Score = 423 bits (468), Expect = 3e-113 Identities = 1393/2137 (65%), Gaps = 49/2137 (2%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || || ||||| | | || || | || ||| | || ||||||||||| || |||| | Sbjct 376721 GTGAATTGAATAGCAGCAGAAGCAGCTTGTGTTCTTAAGTAGTACATACCAGTCTTCAAA 376780 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || |||| |||||||| ||||| |||| || | |||| | || Sbjct 376781 CCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTACCCATAGTTGGGTTCTTTAAG 376840 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 ||||| ||||| |||||| |||||| ||| |||| |||||||| || ||||| | ||| Sbjct 376841 TGAATGTTCATTGATTGAGATTGATCAATGTAAGCACCTCTATCAGCAGCCATATCAATA 376900 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAA-AATCTGTTTGATATCATCTGGAAG 68612 || |||||||| | ||||||||| | ||||| | ||| | ||| || || ||||||| Sbjct 376901 ATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTATAATTTCTTTAAT-TCGTCTGGAAT 376959 Query 68613 GCTCG-TA--TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATT 68669 | ||| || |||||||| || ||| ||| || || | |||||| || |||| | Sbjct 376960 GTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATGATGAAATTCTTCATAGCATCGCT 377019 Query 68670 CCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCC 68729 ||| | | || |||| |||| || | || || || || ||||| ||||| || Sbjct 377020 CCATAGACCTAAATCAACTAAATCTCTTAGCAAATATGGGTTGACAATTTGGAATTCACC 377079 Query 68730 AGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCC 68789 | || ||||| | | |||||| ||| || |||||||| | | || || | || Sbjct 377080 TGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAGCACTCGTTGTAACC 377139 Query 68790 CAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 68849 || |||||| | |||||| ||||| ||||| || |||| ||||||| ||||| | ||| Sbjct 377140 CAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAAGAGTTTCTCAAACC 377199 Query 68850 ATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATT 68909 || | ||| | || |||| | | ||||||||| | ||||| ||| | Sbjct 377200 GTGCTTGGAAATTCTTTCCTTTAATAGATCCCAATCCCATAAATCAGTTGGCTTCTTACC 377259 Query 68910 CCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGG 68969 ||| | ||| |||||| | || | | || || || | | | ||||| || Sbjct 377260 CCATAAGTCGAATTGTAATAGACCTTGAGAAGCTGGAGAACCTTGGAAATTCTCATATGG 377319 Query 68970 TCCTTCCTGTTCAGCTAG----TTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTT 69025 || || | || | | |||| || ||||| ||| | | || || |||| Sbjct 377320 CCCATC----TAAGATTGACAATTCAATCGAAGCTTCTAAAGCAGCATGGTACATGGTTT 377375 Query 69026 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAA-GA 69084 | ||||| | | || | || || ||| | ||| ||||| |||| | || | Sbjct 377376 CAAAAATTTGAATGTTCAAGTCCCTGGCCTCTGGGGAATCAAATGG-TAATCTCAATTGC 377434 Query 69085 ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAA 69144 || || | || ||||| || ||||| |||| | | || ||||| | | || | || || Sbjct 377435 ATGAAAACGTCAGCCAAACCTTGAACACCAACAGCAATTGGTCTGTTTTTCATGTTAGAT 377494 Query 69145 CTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGA-C 69203 || ||| ||| || ||| ||||| || | || || || | || | | ||| | | Sbjct 377495 GTTCTAGCCTCTTCAACAGGGTAATAGTTTCTGTCAATGATCATGTTCA-AGTTCTTAGC 377553 Query 69204 TACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCAT--CTATAA---CA 69258 || || ||| || || | ||||| ||| | | | | | || || | | | Sbjct 377554 AACAACCTTAGTAACTTCATGCAGTTTTTCAAAGTTATACCATG-ATGACTCTGAATCCG 377612 Query 69259 A----ACATATTCAGT----GCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAAT 69310 | || || ||| || || || ||||| ||||| || || || || | | Sbjct 377613 ATTCGACGAATGCAGGCAAAGCCACGGAAGCTAGGTTACAGACGGCAACTTCTTCTGGTG 377672 Query 69311 TTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCT 69370 | ||||| | || || || | ||| | || ||||| |||| || | | Sbjct 377673 AGGAATATTCAACAATTTCACAGCACAAGTTAGATGACTTAATAGTACCCAAGTTCTTTT 377732 Query 69371 GATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCT 69430 | || |||| ||||| || |||||||| | ||||| ||||| || ||||| | | Sbjct 377733 GGTTGGATTTTTCATTACAAGCATCCTTGTATAACATAAATGGAGTGCCTGTTTCCGTTT 377792 Query 69431 GAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCT-TGTAACGCTTC 69489 | | ||| | ||||| | ||| | ||| || | | || | | || | || | Sbjct 377793 GTGCTTCTAAAATAGCATACCATAGCTTTTGAGCCTTGA---CAGTTTGTCTACCTCTGC 377849 Query 69490 --TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATC 69547 |||| |||||||| ||||||| ||| |||||||| || ||| || | || | Sbjct 377850 CTTCTTCTTCATATTTGGTATATAAAGCTTCAAATTCATCACCGTAAAGTTCGTGTAAAC 377909 Query 69548 CAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAA 69607 |||| ||| || | | || | ||| | ||| | || ||||| ||||||| Sbjct 377910 CAGGGGCTTCGGAAGGGGAGAATAAAGTCCATTGAGCATTCTGCTCAACTCTCTTCATAA 377969 Query 69608 ATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTG 69667 | | ||| |||||||| | || || |||||||| | ||| | ||||| || || Sbjct 377970 ACAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCCTTACCGT 378029 Query 69668 TAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 69727 ||| ||| ||| ||||| || || | |||||||||||||||||||| | |||| | Sbjct 378030 GATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGTTCAATGTATAAAG 378089 Query 69728 CCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGA 69787 | | | || |||| ||| || || ||||| || | ||||| |||||||| || | | Sbjct 378090 CGAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCAGTGTTGTTGAAAA 378149 Query 69788 CTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTC 69847 |||| | ||| ||||| ||||| ||||| ||||||| || || | |||||| || Sbjct 378150 CTCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCAATATATGAACCAG 378209 Query 69848 TTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 69907 | | | ||| ||| ||| || ||| || || || || | || || || | ||||| Sbjct 378210 TAGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAAAGCAC 378269 Query 69908 AACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAAC 69967 | | ||||| || ||||| ||||| || || ||| ||| |||| || | ||| | Sbjct 378270 ATTGCTTCAAAGTATCATAAATACCATCGATAGAATCGTCTTTCATAGCAACTAAAAAGC 378329 Query 69968 AGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGA 70027 | ||||||||| || ||| || |||||||||||||| || || |||||||| | Sbjct 378330 ATGAAGACATTTGTGCGTGAGGAGTACCAGCATTAAATAATGTTGGTGAAGCGTGAGTAA 378389 Query 70028 ACCATTTTTCAGA-AAGCAGATTGTATGTTTCAAT-AGCTGATTCTATA-TCCCACTGAT 70084 | || |||| || | | || || || ||||| || | || | | ||| | ||| | | Sbjct 378390 AGTATCTTTCTGACATGTAG-TTATAAGTTTCTATGACCTTA-GCAATATTATCACCG-T 378446 Query 70085 GAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTA 70144 | || || || | || | ||| | | ||||| |||| ||| | | || | Sbjct 378447 GGATACCAATAGAAACTCTCATAACTAAGTGCTGTGGTCTTTCAGCAACAGCACCGTTAA 378506 Query 70145 TTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTC 70204 || |||| | |||||| | |||| ||| ||||| || ||||||||||| || || || | Sbjct 378507 TTCTCAATAAATATGATCTCTCCAAAGTCTTAAAACCGAAATAGTTGTAGGAGAAATCAC 378566 Query 70205 TTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAG 70264 ||||||| |||| ||||||| | || ||| ||| || ||| || || ||| Sbjct 378567 GGTCGTAAACAATAGCAGAATTCAATTCATCACTATGCTTTTGAACGATGTCGTAAACTT 378626 Query 70265 TAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTT 70324 ||||| || |||| | | |||||| || || || | ||| | |||| | || Sbjct 378627 CCTTAGAGATCATTGGAGCCGGCTGACCATTCTTTGGGTTGATATAAGTATATAATTGTT 378686 Query 70325 CCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGG 70384 | || || | |||| |||| |||| | ||||||||| || || || |||||||||| Sbjct 378687 CAATAACTGAAGAAAATTGTTTGGTTGTCTGCTTGTGTAAGTTAGAAATAGCTATTCTGG 378746 Query 70385 CTGCTAGAATAGCATAGTCAGGATG-TTG--TGTAGTACAAGTAGCTGCTATTTCCGCAG 70441 | |||| | ||||| || || || || ||| || ||| ||| | |||| |||| Sbjct 378747 CAGCTAAGGTGGCATAATCTGGGTGAATGGTTGTCATATAAGCAGCAG---TTTCAGCAG 378803 Query 70442 CTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 | || |||| ||||| ||||| ||||| |||||||| Sbjct 378804 CCAAGTTATCCAATTCGATAGTGGTAACACCGTTATA 378840 Score = 264 bits (292), Expect = 2e-65 Identities = 611/913 (67%), Gaps = 21/913 (2%) Strand=Plus/Minus Query 39305 TCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTT 39364 ||||| | |||||| || |||||||| || || | || || || || || || Sbjct 648027 TCTTG-GCCATAACACCAGCCTTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTC 647969 Query 39365 TTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttttt 39424 || || | || || ||||||||||| || || || || || | | || || | || Sbjct 647968 TTACCAGCTAAAGAAATATTTTCCATAAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTC 647909 Query 39425 ttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATT 39484 || | ||||| | | | |||||||| |||||||| || | |||| ||||| | Sbjct 647908 TTGCAACCTAAAGATAATAATAATCTATCAGCAACAAACTCAACGTATTGGCACATCAAT 647849 Query 39485 TCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGAT 39543 || ||||| || | | | | ||||| || ||||| | | | ||||||| | || Sbjct 647848 TCTGCGTTCATACCCAATAATGCACATGGTAAGGCATCCGTGAAGTATCTCTTTT-CAAT 647790 Query 39544 GTCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATG 39603 ||| || || || || || ||| || | || ||| | || | || | ||| Sbjct 647789 GTCAACTGCTTCAGTAATAATCTTGACAACAATTTCTTCATTTGGAG--TGTTGTTCATG 647732 Query 39604 TTTAAACAT--TAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661 | | || ||| || || || ||| |||| || |||||||||| ||| ||||| Sbjct 647731 TGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCA 647672 Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721 ||||| || || | || |||||||| || | |||||| | |||||| || | |||||| Sbjct 647671 TTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAAT 647612 Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG--TAA- 39778 || ||||| |||||||| ||||| || || ||||| ||||| | ||| || || ||| Sbjct 647611 GAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAG 647552 Query 39779 CTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATT 39838 | | || || | ||||| || ||||| ||||| || | ||| | ||||| || Sbjct 647551 CCATTTTCGTTGTTCATCCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATA 647492 Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898 || || |||||||| || | | | || | ||| |||||||| || || || Sbjct 647491 GTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATC 647432 Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958 || | || |||| || ||||||||||| ||| ||||| || ||||| ||||| Sbjct 647431 AATAATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACAC 647372 Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018 | ||||| | |||||| || || | | |||| |||| |||| || || || || || Sbjct 647371 TTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATA 647312 Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078 || || || ||||| || || || || | ||| ||| || |||| | | || Sbjct 647311 CCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTC----GCTTTC 647256 Query 40079 AAT-------TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 40131 | | || |||||||||| |||| ||||||| ||| | |||||| || ||||| Sbjct 647255 ATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCA 647196 Query 40132 AAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191 || || || || ||||| |||||||| | ||| || ||| | |||| ||||| || | Sbjct 647195 GAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAA 647136 Query 40192 AACAAATCTATTT 40204 ||||||||| ||| Sbjct 647135 AACAAATCTTTTT 647123 >seq1 Length=3681944 Score = 122 bits (134), Expect = 1e-22 Identities = 352/532 (66%), Gaps = 11/532 (2%) Strand=Plus/Plus Query 68409 TAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAG 68468 || |||||| ||||| ||||| || ||| |||| | || || ||||||||||| || Sbjct 1059276 TAAATAGTAAATACCAGTTTTTAGTCCTTTCTTCCAAGCATAAAAGTGCATACTTGTAAG 1059335 Query 68469 TTTGGAATAACTTGGATCGGCTATATGAATA--TTCATCGATTGACTTTGATCGATGAAA 68526 || || |||| || || ||||||| || | |||||| ||||| ||||| Sbjct 1059336 CTTCGACATTGTTGGTTCC-CTC-ATGAATAAGTTTAATGATTGAGAATGATCAATGAAT 1059393 Query 68527 GCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTA 68586 | | | | || || | ||| | || | | |||||||||||||||||||| || ||| Sbjct 1059394 GGTGCACGGTCAGCTGACATATCAATTAAATGCTTTTGAGGAATTTCCCAAACTGTTTTA 1059453 Query 68587 AAAATCTGTTTGATATCATCTGGAAGGCTCGTATT---TTGAATGGATCCACCATCGGAT 68643 | | || ||||||| ||| | || | |||||| || || | | | Sbjct 1059454 TACAAAGACTTAATATCATTTGGTATTTCATTAATCAATTGAATTGACCCGTTGTTGCTT 1059513 Query 68644 ATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAAC-TCTAAGGAG 68702 || || ||||||||| | |||||||| | || || ||||| | |||| | Sbjct 1059514 ATTATCTGATTCTTGATATTCTCATTCCATAGATTGAGTTCGATTAAATCGTCTACCAAA 1059573 Query 68703 ATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGT 68762 || |||||| |||||||| || || ||||| ||||| | |||||||||||| || Sbjct 1059574 TAGCT-ATTAACGATTTGAAACTCACCGGATAAGACTCTTCTTGTGTAAATATTAGATGT 1059632 Query 68763 ATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGG 68822 ||| || | | ||||| | ||| || || || | ||| || ||||| ||||| Sbjct 1059633 GATTGGCTCAAAACATTCAGTGAATCCTAGTATCTGTGAAGTCGAGGCAGTAGGCATTAA 1059692 Query 68823 TGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATG-TTTCC 68881 || ||||| || ||||| | ||| | | | | ||||| |||| | ||| | || Sbjct 1059693 GGCAACCAACAACGAGTTTCTGACACCGTTCGATTTTATTTTCGCTTTCA-ATGAATCCC 1059751 Query 68882 AATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCC 68933 ||||||| | ||||||| | |||||| | ||| ||||| || | ||| Sbjct 1059752 AATCCCACAACGAAGATGGTTTATGATTCCACATATCATATTGAAGTACTCC 1059803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908525236480