Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq5 423 3e-113
seq1 122 1e-22
>seq5
Length=1013952
Score = 423 bits (468), Expect = 3e-113
Identities = 1393/2137 (65%), Gaps = 49/2137 (2%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|| || ||||| | | || || | || ||| | || ||||||||||| || |||| |
Sbjct 376721 GTGAATTGAATAGCAGCAGAAGCAGCTTGTGTTCTTAAGTAGTACATACCAGTCTTCAAA 376780
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| |||| |||||||| ||||| |||| || | |||| | ||
Sbjct 376781 CCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTACCCATAGTTGGGTTCTTTAAG 376840
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
||||| ||||| |||||| |||||| ||| |||| |||||||| || ||||| | |||
Sbjct 376841 TGAATGTTCATTGATTGAGATTGATCAATGTAAGCACCTCTATCAGCAGCCATATCAATA 376900
Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAA-AATCTGTTTGATATCATCTGGAAG 68612
|| |||||||| | ||||||||| | ||||| | ||| | ||| || || |||||||
Sbjct 376901 ATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTATAATTTCTTTAAT-TCGTCTGGAAT 376959
Query 68613 GCTCG-TA--TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATT 68669
| ||| || |||||||| || ||| ||| || || | |||||| || |||| |
Sbjct 376960 GTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATGATGAAATTCTTCATAGCATCGCT 377019
Query 68670 CCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCC 68729
||| | | || |||| |||| || | || || || || ||||| ||||| ||
Sbjct 377020 CCATAGACCTAAATCAACTAAATCTCTTAGCAAATATGGGTTGACAATTTGGAATTCACC 377079
Query 68730 AGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCC 68789
| || ||||| | | |||||| ||| || |||||||| | | || || | ||
Sbjct 377080 TGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAGCACTCGTTGTAACC 377139
Query 68790 CAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 68849
|| |||||| | |||||| ||||| ||||| || |||| ||||||| ||||| | |||
Sbjct 377140 CAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAAGAGTTTCTCAAACC 377199
Query 68850 ATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATT 68909
|| | ||| | || |||| | | ||||||||| | ||||| ||| |
Sbjct 377200 GTGCTTGGAAATTCTTTCCTTTAATAGATCCCAATCCCATAAATCAGTTGGCTTCTTACC 377259
Query 68910 CCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGG 68969
||| | ||| |||||| | || | | || || || | | | ||||| ||
Sbjct 377260 CCATAAGTCGAATTGTAATAGACCTTGAGAAGCTGGAGAACCTTGGAAATTCTCATATGG 377319
Query 68970 TCCTTCCTGTTCAGCTAG----TTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTT 69025
|| || | || | | |||| || ||||| ||| | | || || ||||
Sbjct 377320 CCCATC----TAAGATTGACAATTCAATCGAAGCTTCTAAAGCAGCATGGTACATGGTTT 377375
Query 69026 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAA-GA 69084
| ||||| | | || | || || ||| | ||| ||||| |||| | || |
Sbjct 377376 CAAAAATTTGAATGTTCAAGTCCCTGGCCTCTGGGGAATCAAATGG-TAATCTCAATTGC 377434
Query 69085 ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAA 69144
|| || | || ||||| || ||||| |||| | | || ||||| | | || | || ||
Sbjct 377435 ATGAAAACGTCAGCCAAACCTTGAACACCAACAGCAATTGGTCTGTTTTTCATGTTAGAT 377494
Query 69145 CTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGA-C 69203
|| ||| ||| || ||| ||||| || | || || || | || | | ||| | |
Sbjct 377495 GTTCTAGCCTCTTCAACAGGGTAATAGTTTCTGTCAATGATCATGTTCA-AGTTCTTAGC 377553
Query 69204 TACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCAT--CTATAA---CA 69258
|| || ||| || || | ||||| ||| | | | | | || || | | |
Sbjct 377554 AACAACCTTAGTAACTTCATGCAGTTTTTCAAAGTTATACCATG-ATGACTCTGAATCCG 377612
Query 69259 A----ACATATTCAGT----GCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAAT 69310
| || || ||| || || || ||||| ||||| || || || || | |
Sbjct 377613 ATTCGACGAATGCAGGCAAAGCCACGGAAGCTAGGTTACAGACGGCAACTTCTTCTGGTG 377672
Query 69311 TTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCT 69370
| ||||| | || || || | ||| | || ||||| |||| || | |
Sbjct 377673 AGGAATATTCAACAATTTCACAGCACAAGTTAGATGACTTAATAGTACCCAAGTTCTTTT 377732
Query 69371 GATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCT 69430
| || |||| ||||| || |||||||| | ||||| ||||| || ||||| | |
Sbjct 377733 GGTTGGATTTTTCATTACAAGCATCCTTGTATAACATAAATGGAGTGCCTGTTTCCGTTT 377792
Query 69431 GAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCT-TGTAACGCTTC 69489
| | ||| | ||||| | ||| | ||| || | | || | | || | || |
Sbjct 377793 GTGCTTCTAAAATAGCATACCATAGCTTTTGAGCCTTGA---CAGTTTGTCTACCTCTGC 377849
Query 69490 --TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATC 69547
|||| |||||||| ||||||| ||| |||||||| || ||| || | || |
Sbjct 377850 CTTCTTCTTCATATTTGGTATATAAAGCTTCAAATTCATCACCGTAAAGTTCGTGTAAAC 377909
Query 69548 CAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAA 69607
|||| ||| || | | || | ||| | ||| | || ||||| |||||||
Sbjct 377910 CAGGGGCTTCGGAAGGGGAGAATAAAGTCCATTGAGCATTCTGCTCAACTCTCTTCATAA 377969
Query 69608 ATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTG 69667
| | ||| |||||||| | || || |||||||| | ||| | ||||| || ||
Sbjct 377970 ACAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCCTTACCGT 378029
Query 69668 TAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 69727
||| ||| ||| ||||| || || | |||||||||||||||||||| | |||| |
Sbjct 378030 GATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGTTCAATGTATAAAG 378089
Query 69728 CCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGA 69787
| | | || |||| ||| || || ||||| || | ||||| |||||||| || | |
Sbjct 378090 CGAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCAGTGTTGTTGAAAA 378149
Query 69788 CTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTC 69847
|||| | ||| ||||| ||||| ||||| ||||||| || || | |||||| ||
Sbjct 378150 CTCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCAATATATGAACCAG 378209
Query 69848 TTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 69907
| | | ||| ||| ||| || ||| || || || || | || || || | |||||
Sbjct 378210 TAGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAAAGCAC 378269
Query 69908 AACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAAC 69967
| | ||||| || ||||| ||||| || || ||| ||| |||| || | ||| |
Sbjct 378270 ATTGCTTCAAAGTATCATAAATACCATCGATAGAATCGTCTTTCATAGCAACTAAAAAGC 378329
Query 69968 AGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGA 70027
| ||||||||| || ||| || |||||||||||||| || || |||||||| |
Sbjct 378330 ATGAAGACATTTGTGCGTGAGGAGTACCAGCATTAAATAATGTTGGTGAAGCGTGAGTAA 378389
Query 70028 ACCATTTTTCAGA-AAGCAGATTGTATGTTTCAAT-AGCTGATTCTATA-TCCCACTGAT 70084
| || |||| || | | || || || ||||| || | || | | ||| | ||| | |
Sbjct 378390 AGTATCTTTCTGACATGTAG-TTATAAGTTTCTATGACCTTA-GCAATATTATCACCG-T 378446
Query 70085 GAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTA 70144
| || || || | || | ||| | | ||||| |||| ||| | | || |
Sbjct 378447 GGATACCAATAGAAACTCTCATAACTAAGTGCTGTGGTCTTTCAGCAACAGCACCGTTAA 378506
Query 70145 TTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTC 70204
|| |||| | |||||| | |||| ||| ||||| || ||||||||||| || || || |
Sbjct 378507 TTCTCAATAAATATGATCTCTCCAAAGTCTTAAAACCGAAATAGTTGTAGGAGAAATCAC 378566
Query 70205 TTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAG 70264
||||||| |||| ||||||| | || ||| ||| || ||| || || |||
Sbjct 378567 GGTCGTAAACAATAGCAGAATTCAATTCATCACTATGCTTTTGAACGATGTCGTAAACTT 378626
Query 70265 TAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTT 70324
||||| || |||| | | |||||| || || || | ||| | |||| | ||
Sbjct 378627 CCTTAGAGATCATTGGAGCCGGCTGACCATTCTTTGGGTTGATATAAGTATATAATTGTT 378686
Query 70325 CCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGG 70384
| || || | |||| |||| |||| | ||||||||| || || || ||||||||||
Sbjct 378687 CAATAACTGAAGAAAATTGTTTGGTTGTCTGCTTGTGTAAGTTAGAAATAGCTATTCTGG 378746
Query 70385 CTGCTAGAATAGCATAGTCAGGATG-TTG--TGTAGTACAAGTAGCTGCTATTTCCGCAG 70441
| |||| | ||||| || || || || ||| || ||| ||| | |||| ||||
Sbjct 378747 CAGCTAAGGTGGCATAATCTGGGTGAATGGTTGTCATATAAGCAGCAG---TTTCAGCAG 378803
Query 70442 CTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478
| || |||| ||||| ||||| ||||| ||||||||
Sbjct 378804 CCAAGTTATCCAATTCGATAGTGGTAACACCGTTATA 378840
Score = 264 bits (292), Expect = 2e-65
Identities = 611/913 (67%), Gaps = 21/913 (2%)
Strand=Plus/Minus
Query 39305 TCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTT 39364
||||| | |||||| || |||||||| || || | || || || || || ||
Sbjct 648027 TCTTG-GCCATAACACCAGCCTTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTC 647969
Query 39365 TTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttttt 39424
|| || | || || ||||||||||| || || || || || | | || || | ||
Sbjct 647968 TTACCAGCTAAAGAAATATTTTCCATAAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTC 647909
Query 39425 ttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATT 39484
|| | ||||| | | | |||||||| |||||||| || | |||| ||||| |
Sbjct 647908 TTGCAACCTAAAGATAATAATAATCTATCAGCAACAAACTCAACGTATTGGCACATCAAT 647849
Query 39485 TCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGAT 39543
|| ||||| || | | | | ||||| || ||||| | | | ||||||| | ||
Sbjct 647848 TCTGCGTTCATACCCAATAATGCACATGGTAAGGCATCCGTGAAGTATCTCTTTT-CAAT 647790
Query 39544 GTCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATG 39603
||| || || || || || ||| || | || ||| | || | || | |||
Sbjct 647789 GTCAACTGCTTCAGTAATAATCTTGACAACAATTTCTTCATTTGGAG--TGTTGTTCATG 647732
Query 39604 TTTAAACAT--TAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661
| | || ||| || || || ||| |||| || |||||||||| ||| |||||
Sbjct 647731 TGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCA 647672
Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721
||||| || || | || |||||||| || | |||||| | |||||| || | ||||||
Sbjct 647671 TTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAAT 647612
Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG--TAA- 39778
|| ||||| |||||||| ||||| || || ||||| ||||| | ||| || || |||
Sbjct 647611 GAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAG 647552
Query 39779 CTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATT 39838
| | || || | ||||| || ||||| ||||| || | ||| | ||||| ||
Sbjct 647551 CCATTTTCGTTGTTCATCCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATA 647492
Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898
|| || |||||||| || | | | || | ||| |||||||| || || ||
Sbjct 647491 GTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATC 647432
Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958
|| | || |||| || ||||||||||| ||| ||||| || ||||| |||||
Sbjct 647431 AATAATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACAC 647372
Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018
| ||||| | |||||| || || | | |||| |||| |||| || || || || ||
Sbjct 647371 TTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATA 647312
Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078
|| || || ||||| || || || || | ||| ||| || |||| | | ||
Sbjct 647311 CCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTC----GCTTTC 647256
Query 40079 AAT-------TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 40131
| | || |||||||||| |||| ||||||| ||| | |||||| || |||||
Sbjct 647255 ATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCA 647196
Query 40132 AAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191
|| || || || ||||| |||||||| | ||| || ||| | |||| ||||| || |
Sbjct 647195 GAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAA 647136
Query 40192 AACAAATCTATTT 40204
||||||||| |||
Sbjct 647135 AACAAATCTTTTT 647123
>seq1
Length=3681944
Score = 122 bits (134), Expect = 1e-22
Identities = 352/532 (66%), Gaps = 11/532 (2%)
Strand=Plus/Plus
Query 68409 TAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAG 68468
|| |||||| ||||| ||||| || ||| |||| | || || ||||||||||| ||
Sbjct 1059276 TAAATAGTAAATACCAGTTTTTAGTCCTTTCTTCCAAGCATAAAAGTGCATACTTGTAAG 1059335
Query 68469 TTTGGAATAACTTGGATCGGCTATATGAATA--TTCATCGATTGACTTTGATCGATGAAA 68526
|| || |||| || || ||||||| || | |||||| ||||| |||||
Sbjct 1059336 CTTCGACATTGTTGGTTCC-CTC-ATGAATAAGTTTAATGATTGAGAATGATCAATGAAT 1059393
Query 68527 GCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTA 68586
| | | | || || | ||| | || | | |||||||||||||||||||| || |||
Sbjct 1059394 GGTGCACGGTCAGCTGACATATCAATTAAATGCTTTTGAGGAATTTCCCAAACTGTTTTA 1059453
Query 68587 AAAATCTGTTTGATATCATCTGGAAGGCTCGTATT---TTGAATGGATCCACCATCGGAT 68643
| | || ||||||| ||| | || | |||||| || || | | |
Sbjct 1059454 TACAAAGACTTAATATCATTTGGTATTTCATTAATCAATTGAATTGACCCGTTGTTGCTT 1059513
Query 68644 ATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAAC-TCTAAGGAG 68702
|| || ||||||||| | |||||||| | || || ||||| | |||| |
Sbjct 1059514 ATTATCTGATTCTTGATATTCTCATTCCATAGATTGAGTTCGATTAAATCGTCTACCAAA 1059573
Query 68703 ATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGT 68762
|| |||||| |||||||| || || ||||| ||||| | |||||||||||| ||
Sbjct 1059574 TAGCT-ATTAACGATTTGAAACTCACCGGATAAGACTCTTCTTGTGTAAATATTAGATGT 1059632
Query 68763 ATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGG 68822
||| || | | ||||| | ||| || || || | ||| || ||||| |||||
Sbjct 1059633 GATTGGCTCAAAACATTCAGTGAATCCTAGTATCTGTGAAGTCGAGGCAGTAGGCATTAA 1059692
Query 68823 TGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATG-TTTCC 68881
|| ||||| || ||||| | ||| | | | | ||||| |||| | ||| | ||
Sbjct 1059693 GGCAACCAACAACGAGTTTCTGACACCGTTCGATTTTATTTTCGCTTTCA-ATGAATCCC 1059751
Query 68882 AATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCC 68933
||||||| | ||||||| | |||||| | ||| ||||| || | |||
Sbjct 1059752 AATCCCACAACGAAGATGGTTTATGATTCCACATATCATATTGAAGTACTCC 1059803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908525236480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |