Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq5 181 8e-41
seq1 134 1e-26
>seq5
Length=1013952
Score = 181 bits (200), Expect = 8e-41
Identities = 573/873 (66%), Gaps = 29/873 (3%)
Strand=Plus/Plus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||| |||| |||||| |||| ||||| || |||||||||||||| || || |
Sbjct 647127 AGATTTGTTTTGTTCCCAATTAAATACCATGAAATCTGGCAAATGTACAAGAAGGCTGAA 647186
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA--CTTA------GCACATT 43808
|| || || ||||| ||||||||| ||||||| | || || || | | |||
Sbjct 647187 GCTTCTTTCTGGACTGCAGAAGAAATTGATTTATCAAAGGATACTCATGACTGGAACAAC 647246
Query 43809 GGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTG 43868
|||| || ||| | |||| | ||| || || ||||| || || ||||| |
Sbjct 647247 AGATTAAATGAAAGC-----GAAAGATTTTTCATTTCAAGAGTTTTAGCTTTCTTTGCAG 647301
Query 43869 CGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTAC 43928
| |||||| || || || || || |||||| ||| | ||||| ||| | |
Sbjct 647302 CCTCCGACGGTATTGTTAACGAGAACTTGGTTGAAAACTTTTCTGCCGAAGTCCAAATTC 647361
Query 43929 CAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGT 43988
||||||| ||||| || || || || || || ||||| || || || |||| |
Sbjct 647362 CAGAAGCCAAGTGTTTCTACGGTTTCCAGATCATGATGGAAAACATCCACTCTGAAACTT 647421
Query 43989 ACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATG 44048
|| | |||| || || || | || ||| | ||| | || || ||||
Sbjct 647422 ACTCATTATTGATCGACACCTATGTTAAGGATCCAAAGGAGGCTGACTTCTTATTCAATG 647481
Query 44049 CGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATT 44108
| || || || | ||| || || | || || ||||||||| | | |||||| ||
Sbjct 647482 CTATTGAGACTATTCCTTGCATCAAGGAAAAGGCTGACTGGGCCATGAGATGGATGAACA 647541
Query 44109 C---AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCT 44165
||||| | || | ||| || | || || ||||| | ||| ||||| || ||||
Sbjct 647542 ACGAAAATGGCTTATTCGCCGAAAGATTAGTTGCCTTTGCTGCTGTCGAAGGTATCTTCT 647601
Query 44166 TTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGA 44225
| || || || ||||| | || |||||||| || || |||| | ||||| || || |
Sbjct 647602 TCTCTGGTTCATTTGCTTCTATCTTTTGGTTGAAAAAGAGAGGCCTAATGCCGGGCTTAA 647661
Query 44226 CGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGT 44285
| || || ||||| || || || | |||||||| ||||| ||||||||||| || |
Sbjct 647662 CTTTCTCTAATGAATTGATTTGTAGAGATGAAGGTTTACACACTGATTTTGCTTGTTTAT 647721
Query 44286 TACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAG---ATATTGTTG 44342
|| || | | | || || | | || ||| |||| |||| | | ||| ||
Sbjct 647722 TA-TTCTCTCAC-ATGA-ACAACACTCC-AAATG-AAGA-AATTGTTGTCAAGATTATTA 647775
Query 44343 TAGAGGCAGTAAAGATAGAACAAGA-ATTTATGACAACAGCATTACC-TGTAAATTTAAT 44400
|| ||||| | || ||| |||| || | || || ||||| ||| | ||| |
Sbjct 647776 CTGAAGCAGTTGACATTGAA-AAGAGATACTTCACGGATGCCTTACCATGTGCA-TTATT 647833
Query 44401 AGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTT 44460
|| ||||| | | |||||| |||||| |||| | |||| ||| | ||| | ||
Sbjct 647834 GGGTATGAACGCAGAATTGATGTGCCAATACGTTGAGTTTGTTGCTGATAGATTATTATT 647893
Query 44461 GGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATAT 44520
| |||||| | || ||||| | || | ||||| || || ||||||||||||||
Sbjct 647894 ATCTTTAGGTTGCAAGAAGCACTACAAGGTTAACAACCCATTCGACTTTATGGAAAATAT 647953
Query 44521 TTCGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553
||| || | || || || ||||| ||||||||
Sbjct 647954 TTCTTTAGCTGGTAAGACCAACTTCTTTGAAAA 647986
>seq1
Length=3681944
Score = 134 bits (148), Expect = 1e-26
Identities = 291/435 (67%), Gaps = 24/435 (6%)
Strand=Plus/Minus
Query 19360 TATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417
|| || ||||| ||| ||| ||||| || ||||| ||| || || |||| | | |
Sbjct 2341156 TACGGTCCACCAGGTACTGGTAAAACTTTGATTGCTAGACAAATTGGTAAGATGTTGAAC 2341097
Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
|||| ||||| |||||||| |||||||||||||| || ||||| || ||| |
Sbjct 2341096 GCAAAGGAACCT---AAAATTGTCAATGGTCCTGAAATTCTATCCAAATACGTTGGTTCA 2341040
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTT------GCTGACGCTGAAGAAGAACAAAAACGT 19530
|||||||||||| | || ||||||| || || || || | || |||| ||
Sbjct 2341039 TCGGAAGAAAATATCAGAAATTTGTTTAAGGATGCAGAGGCCGAGTATAAATCAAAAGGT 2340980
Query 19531 TTAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAG 19590
||| | ||| || || || || || | |||||||| || | | | ||
Sbjct 2340979 GAAGG------ATCTTCGTTACATATCATTATCTTTGATGAATTAGATTCTGTTTTCAAA 2340926
Query 19591 CAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTG 19644
|||||||| || || || | || || ||| | |||||| ||||| | |
Sbjct 2340925 CAAAGAGGCTCAAGAGGTGATGGTACCGGTGTTGCTGATAATGTTGTTAATCAGTTATTA 2340866
Query 19645 TCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGA 19704
| ||| | || |||||| | ||| ||||||| |||||||||||||| ||||||||||||
Sbjct 2340865 GCCAAAATGGATGGTGTTGATCAATTGAATAACATTTTAGTTATTGGTATGACTAATAGA 2340806
Query 19705 CTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATT 19764
|| || ||||| || || || | |||| || | || ||| | | | || |||
Sbjct 2340805 AGAGATTTGATAGATAGTGCATTGCTGAGACCGGGAAGATTTGAAGTTCAAGTTGAGATT 2340746
Query 19765 AACTTACCCGATGAA 19779
| ||||| ||||||
Sbjct 2340745 CATTTACCTGATGAA 2340731
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 40695 CCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGGTTT 40754
|| ||| |||| || ||| | |||| ||||||||| | | |||||| | ||||||
Sbjct 404674 CCTTTGTTAACCACTAAACGTGTCTTTTTTAAAGGCATTTTACATGAACTGCTCTGGTTT 404615
Query 40755 ATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAATGCG 40814
|| |||| ||||| ||||||||||| || | |||| || || | || ||| | |
Sbjct 404614 GTCCAAGGGTGTACAGATGCTAAGAAACTAACCGAAAAGGGCGTCAAGATCTGGGAAGGT 404555
Query 40815 CACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTT 40874
|| | |||| | |||||| | | || || ||||||| |||||||| |||
Sbjct 404554 AACGGATCTAGAGAATATTTAGATTCACTTGGTCTAACAGATAGGAGAGAAGGTGACCTT 404495
Query 40875 GGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCA 40913
|| || || ||||| || || | | |||||||||| |||
Sbjct 404494 GGCCCAGTGTATGGTTTCCAATGGAGACATTTTGGTGCA 404456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455844992160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |