Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 seq5 82.4 6e-11 >seq1 Length=3681944 Score = 89.7 bits (98), Expect = 4e-13 Identities = 171/249 (69%), Gaps = 5/249 (2%) Strand=Plus/Plus Query 130735 ATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTA 130794 ||| | |||||||| |||||| ||||||||| ||||| | | ||| | ||| ||| Sbjct 1059561 ATCGTCTACCAAATAGCTATTAACGATTTGAAACTCACCGGATAAGACTCTTCTTGTGTA 1059620 Query 130795 AATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGC 130854 ||| || |||| || ||||| |||| || || | ||| |||| || | || Sbjct 1059621 AATATTAGATGTGATTGGCTCAAAACATTCAGTGAATCCTAGTATCTGTGAAGTCGAGGC 1059680 Query 130855 GGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTT 130914 || ||||| | || || || | || || | | ||||| || | ||||| ||||| Sbjct 1059681 AGTAGGCATTAAGGCAACCAACAACGAGTTTCTGACACCGTTCGATTTTATTTT-CGCTT 1059739 Query 130915 -CAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTA 130973 |||| |||||||||||| | || | ||||| || |||||||||||| |||| | Sbjct 1059740 TCAATGAATCCCAATCCCACAACGAAGATGGTTT---ATGATTCCACATATCATATTGAA 1059796 Query 130974 GTATGCCTT 130982 ||| |||| Sbjct 1059797 GTACTCCTT 1059805 >seq5 Length=1013952 Score = 82.4 bits (90), Expect = 6e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 130760 ATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAG 130819 ||||| || ||||| || || || | ||| ||||||||| ||| | ||||| ||| Sbjct 377066 ATTTGGAATTCACCTGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAG 377125 Query 130820 GATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGA 130879 | ||||||| || || ||||||| || | || || ||||| |||| |||| | Sbjct 377126 CACTCGTTGTAACCCAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAA 377185 Query 130880 GAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA 130934 || || | | ||||||| | | ||| || ||| ||| |||||||||||||| Sbjct 377186 GAGTTTCTCAAACCGTGCTTGGAAATTCTTTCCTTTAATAGATCCCAATCCCATA 377240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934234275584