Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 4e-13
seq5 82.4 6e-11
>seq1
Length=3681944
Score = 89.7 bits (98), Expect = 4e-13
Identities = 171/249 (69%), Gaps = 5/249 (2%)
Strand=Plus/Plus
Query 130735 ATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTA 130794
||| | |||||||| |||||| ||||||||| ||||| | | ||| | ||| |||
Sbjct 1059561 ATCGTCTACCAAATAGCTATTAACGATTTGAAACTCACCGGATAAGACTCTTCTTGTGTA 1059620
Query 130795 AATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGC 130854
||| || |||| || ||||| |||| || || | ||| |||| || | ||
Sbjct 1059621 AATATTAGATGTGATTGGCTCAAAACATTCAGTGAATCCTAGTATCTGTGAAGTCGAGGC 1059680
Query 130855 GGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTT 130914
|| ||||| | || || || | || || | | ||||| || | ||||| |||||
Sbjct 1059681 AGTAGGCATTAAGGCAACCAACAACGAGTTTCTGACACCGTTCGATTTTATTTT-CGCTT 1059739
Query 130915 -CAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTA 130973
|||| |||||||||||| | || | ||||| || |||||||||||| |||| |
Sbjct 1059740 TCAATGAATCCCAATCCCACAACGAAGATGGTTT---ATGATTCCACATATCATATTGAA 1059796
Query 130974 GTATGCCTT 130982
||| ||||
Sbjct 1059797 GTACTCCTT 1059805
>seq5
Length=1013952
Score = 82.4 bits (90), Expect = 6e-11
Identities = 123/175 (70%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 130760 ATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAG 130819
||||| || ||||| || || || | ||| ||||||||| ||| | ||||| |||
Sbjct 377066 ATTTGGAATTCACCTGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAG 377125
Query 130820 GATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGA 130879
| ||||||| || || ||||||| || | || || ||||| |||| |||| |
Sbjct 377126 CACTCGTTGTAACCCAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAA 377185
Query 130880 GAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA 130934
|| || | | ||||||| | | ||| || ||| ||| ||||||||||||||
Sbjct 377186 GAGTTTCTCAAACCGTGCTTGGAAATTCTTTCCTTTAATAGATCCCAATCCCATA 377240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934234275584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |