Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5 235 7e-57
seq1 107 2e-18
seq7 84.2 3e-11
>seq5
Length=1013952
Score = 235 bits (260), Expect = 7e-57
Identities = 1118/1749 (64%), Gaps = 47/1749 (3%)
Strand=Plus/Plus
Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428
|||||||| || ||||| | || | ||||| |||| | ||||| || | | |||
Sbjct 376760 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTA 376819
Query 110429 GACATCGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATG-AAGCGC 110485
||| ||||| |||| |||| |||||| |||| ||| |||||| |||| |
Sbjct 376820 CCCATAGTTGGGTTCTTTAAGTGAAT--GTTCATTGATTGAGATTGATCAATGTAAGCAC 376877
Query 110486 CCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545
| | | || ||||||||||| | ||| ||||||||| ||||| ||
Sbjct 376878 CTCTATCA-GCAGCCATATCAATAATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTAT 376936
Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605
| ||||| | || ||||| || | | | || || || || || | | |
Sbjct 376937 AATTTCTTTAATTCGTCTGGAATGTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATG 376996
Query 110606 ATGAGATCCTTCATATCCTTGGACCAGAGACC--AATCTTCTTGAGGTCATTGACGAGGT 110663
|||| || ||||||| | | | ||| ||||| |||| || | || | | | |
Sbjct 376997 ATGAAATTCTTCATAGCATCGCTCCATAGACCTAAATCAACTAAATCTCTTAGCAAATAT 377056
Query 110664 GCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGT 110723
| ||||||||| || |||||||| || |||||| ||| ||||| | ||||
Sbjct 377057 GG--GTTGACAATTTGGAATTCACCTGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGT 377114
Query 110724 ATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTG 110783
||||||| ||||| || || | |||||| ||||||| || || || || |||||||| |
Sbjct 377115 ATGGTTCGAAGCACTCGTTGTAACCCAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAG 377174
Query 110784 CCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGT 110843
||| ||| | | ||| | | ||| | || || | |||||| | | |||||| |
Sbjct 377175 CCAGCAATAAAGAGTTTCTCAAACCGTGCTTGGAAATTCTTTCCTTTAATAGATCCCAAT 377234
Query 110844 CG--TAGTTGAGCTTGGTTTCACCTTCCCACAT--GTCAAACTGAAGCACCCCTTGGGAC 110899
| || | || |||| ||| || || ||| ||| || || | | ||||| ||
Sbjct 377235 CCCATAAATCAG-TTGGCTTC---TTACCCCATAAGTCGAATTGTAATAGACCTTGAGAA 377290
Query 110900 GCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGG--GCTTCAGCCAATTCACAGCTCG 110957
|| |||||||| | || | ||||| | || | | || | ||||||| |
Sbjct 377291 GCTGGAGAACCTTGGAAATTCTCATATGGCCCATCTAAGATTGA--CAATTCAATCGAAG 377348
Query 110958 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 111017
| || | | || || |||||||||||||| || || |||| ||| |||| ||
Sbjct 377349 CTTCTAAAGCAGCATGGTACATGGTTTCAAAAATTTGAATGTTCAAGTCCCTGGCCTCTG 377408
Query 111018 CTGAATCAAATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGACCTTGAACACCCA 111074
|||||||||| ||| | ||| || || || || || | |||||||||||| |
Sbjct 377409 GGGAATCAAATG-GTAAT--CTCAATTGCATGAAAACGTCAGCCAAACCTTGAACACCAA 377465
Query 111075 AACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTC 111134
| |||| ||||||| | ||| ||||| ||| || ||||| || ||| | ||||
Sbjct 377466 CAGCAATTGGTCTGTTTTTCATGTTAGATGTTCTAGCCTCTTCAACAGGGTAATAGTTTC 377525
Query 111135 TGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCAT 111194
||||||||| ||| | || || | ||||| ||| || | |||||| |||||||||
Sbjct 377526 TGTCAATGATCATGTTCAAGTTCTTAGCAACAACCTTAGTAACTTCATGCAGTTTTTCAA 377585
Query 111195 AATCAAAAGTGCGAGTCTCT---TC--ATT-GACATACTTTGGAAGGGCGATTGATGCCA 111248
| | | | | |||| || ||| ||| | || | || | || || |
Sbjct 377586 AGTTATACCATGATGACTCTGAATCCGATTCGACGAATGCAGGCAAAGCCACGGAAGCTA 377645
Query 111249 AATTGCAAACAGC--CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTT 111306
|| || || || | ||| | | | | || || | |||||| || |||||
Sbjct 377646 GGTTACAGACGGCAACTTCTTCTGGTGAG--GAATATTCAACAATTTCACAGCACAAGTT 377703
Query 111307 GGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTA 111366
|| |||||| || ||||| ||||||||||| || | || || |||||||||||
Sbjct 377704 AGATGACTTAATAGTACCCAAGTTCTTTTGGTTGGATTTTTCATTACAAGCATCCTTGTA 377763
Query 111367 GAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGG 111425
| ||| | || || || || ||||| |||| || | |||||| | ||| | | | |
Sbjct 377764 TAACATAAATGGAGTGCCTGTTTCCGTTTGTGCTTCTAAAATAGCATACCATAGCTTTTG 377823
Query 111426 CGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 111485
| || | ||| | | | | || || | || || || || || | |||||||
Sbjct 377824 AGCCTTG-ACAGTTTGTCTACCTCTGCCTTCTTCTTCATATTTGGTATATAAAGCTTCAA 377882
Query 111486 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATT 111545
| || ||||| ||| | ||| || || | | || |||| | || |||||
Sbjct 377883 ATTCATCACCGTAAAGTTCGTGTAAACCAGGGGCTTCGGAAGGGGAGAATAAAGTCCATT 377942
Query 111546 GACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 111605
|| || | |||||| | |||||| || | ||||||||||| | || | || ||||
Sbjct 377943 GAGCATTCTGCTCAACTCTCTTCATAAACAAATCTGGAATCCATAAGGCCGGGAATAGAT 378002
Query 111606 CTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 111664
||||| | | || | ||||| | ||| || || || | || | ||| || | ||||
Sbjct 378003 CTCTAGCTCTGATC-TCTTCCTTACCGTGATTCTTTCTAATATCGATGAAATCAAAGATA 378061
Query 111665 TCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTG 111720
|| | |||||||| |||| || | |||| || || |||| | ||| || |
Sbjct 378062 TCAGAATGCCATGGTTCAATGTATAAAGCGAAAGCACCTGGTCTTTTGTTACCCCCCTGG 378121
Query 111721 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 111780
| ||||| | || ||| ||| || || | || ||||||||| ||||| | ||
Sbjct 378122 -TCAACATATCTTGCAGTGTTGTTGAAAACTCTAATCATTGGAATGATACCGTTAGAAGT 378180
Query 111781 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 111840
|||||| || || |||| || | | | ||| | | ||| ||||| | |||||
Sbjct 378181 ACCATTAGTACCGGCAATATATGAACCAGTAGATCTAATGTTATGAATGTGTAAACCAAT 378240
Query 111841 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 111900
||| ||||| ||| || || ||||| | | | | ||| |||| ||||| | |||
Sbjct 378241 ACCACCAGCAGTCTTGGAAATCAAAGCACATTGCTTCAAAGTATCATAAATACCATCGAT 378300
Query 111901 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 111960
|| || || || | || | | ||||| ||||| || | || ||||||||
Sbjct 378301 AGAATCGTCTTTCATAGCAACTAAAAAGCATGAAGACATTTGTGCGTGAGGAGTACCAGC 378360
Query 111961 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTC 112020
||| || | ||||||| |||||| | || | || ||||| | || || || ||
Sbjct 378361 ATTAAATAATGTTGGTGAAGCGTGAGTAAAGTATCTTTCTGACATGTAGTTATAAGTTTC 378420
Query 112021 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTG 112080
| ||| | |||| | || |||||||| || || | || | ||| | | || |||
Sbjct 378421 TATGACCTTAGCAATATTATCACCGTGGATACCAATAGAAACTCTCATAACTAAGTGCTG 378480
Query 112081 TGGGGTTTC 112089
||| ||||
Sbjct 378481 TGGTCTTTC 378489
Score = 102 bits (112), Expect = 1e-16
Identities = 346/529 (65%), Gaps = 25/529 (5%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| | ||| ||||||| |||| | |||||| ||||| || ||
Sbjct 647713 GCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCC 647654
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777
||||| || || | ||| ||||||||| | |||| ||| ||||| || |||||||||||
Sbjct 647653 GGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCA-AATGAACCAGAGAAGAAGAT 647595
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGA--GACTTTGCATCA 122835
||| || ||| ||||| |||| | | ||||||||| ||| | | ||| |
Sbjct 647594 ACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTG--TTC 647537
Query 122836 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 122895
| |||| |||| ||||| | ||||| | || || || || | ||| | || || |
Sbjct 647536 ATCCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTG 647477
Query 122896 AATAA-----CTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAAT 122950
||||| | || || || | |||||||| || |||| |||||| ||| |
Sbjct 647476 AATAAGAAGTCAGCCTCCTT-----TGGATCCTTAACATAGGTGTCGATCAATAATGAGT 647422
Query 122951 ATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCG 123009
| ||||| || | ||| ||| ||| | || | ||||||| | |||||
Sbjct 647421 AAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGA-AACCGTAGAAACACTTGGCTTCT 647363
Query 123010 CTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 123069
|| || || || | | ||| || | | | ||||| |||||| || |||||
Sbjct 647362 GGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAG 647303
Query 123070 CCAGCAAAGAATGCCAGGATGTACTT--TATGAATTTCTTTTCATTTTCATTCA---GGG 123124
| |||||||| || | | ||| ||||| |||| ||||||| | |
Sbjct 647302 GCTGCAAAGAAAGCTA--AAACTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTGT 647245
Query 123125 TCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
| |||||||| | | ||| || || ||||||| |||||| ||||||||
Sbjct 647244 TGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCA 647196
>seq1
Length=3681944
Score = 107 bits (118), Expect = 2e-18
Identities = 221/320 (69%), Gaps = 9/320 (3%)
Strand=Plus/Plus
Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599
|| || ||||| ||| ||||||||||| | ||| | |||||| |||||||| || |
Sbjct 2805783 AAACCGTCCATTTCGACTAGTAATTGATTCAATGTGTTTTCTCTTTCATCATTA-CTTCC 2805841
Query 11600 AT-ACCACCAGCACTGCG---TTG-CTTGCCCACCGCATCAATCTCATCAATGAAGACAA 11654
| ||| | | | || | ||| ||| || | |||||||||||||||| |||| ||
Sbjct 2805842 AGCACCTCTACC-CTTAGATCTTGACTTTCCGATGGCATCAATCTCATCAACAAAGATAA 2805900
Query 11655 TACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACAC 11714
|| | || |||||| | ||| | || || | || ||||| || ||||| ||||
Sbjct 2805901 TAGAAGGAGCATTTTCTCTGGCAACTTTGAACAATTCACGAACTCTAGAAGCACCAACAC 2805960
Query 11715 CAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGAT-GAATGGGACATTTGATTCA 11773
|||||||||| || ||||| | | |||| || | || |||||| |||| | |||
Sbjct 2805961 CAACAAACATTTCAACAAATTCAGAACCAGA-AACAGAATAGAATGGAACATCAGCCTCA 2806019
Query 11774 CCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCG 11833
|| || | ||| ||| | || ||||| || |||||||| ||| | | || |||
Sbjct 2806020 CCAGCAGTTGCTTTGGCTAACAGAGTCTTACCGGTACCTGGAGGACCTGATAAAATGGCA 2806079
Query 11834 CCTCGGGGGATCTTGGCACC 11853
|||| || ||||| || ||
Sbjct 2806080 CCTCTCGGAATCTTAGCGCC 2806099
Score = 87.8 bits (96), Expect = 2e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 111239 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298
|| ||||||||||| |||||||| || ||||| || || || || | ||||||
Sbjct 1060162 ATCGATGCCAAATTACAAACAGCTGTTTCATCTTTCGATGAATATTCAACAATTTCACAG 1060221
Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358
|||||||| || ||||| || |||||||||||||| || |||| |||||| |||
Sbjct 1060222 CATAAGTTTGATGATTTAATTGTACCCAAATTCTTTTGATTCGACTTCACGTTGCAGGCA 1060281
Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399
|| || || | || | | || | || || ||||| || ||
Sbjct 1060282 TCTTTATACAACAAGAATGGATTTCCAGTTTCCGTTTGGGA 1060322
>seq7
Length=781880
Score = 84.2 bits (92), Expect = 3e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
|| ||| | ||||||||| |||| ||||| |||| |||||||||||| ||||||
Sbjct 265530 TACGGTAGAGTTGCACCAAGATCTGGTCTTGCTGCAAAGCATGGTATTTCCACTGGTGCT 265471
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
||||||||||| |||| || | ||| || | || | || | ||||| ||| ||||
Sbjct 265470 GGTGTTATTGACGCCGATTACAGAGGCGAGATTAAGATTATTTTATTCAACCACTCAGAC 265411
Query 164724 AAAGACTTTGAGGT 164737
|| || || |||||
Sbjct 265410 AAGGATTTCGAGGT 265397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031748787200
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