Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 192 7e-44 seq1 87.8 2e-12 >seq5 Length=1013952 Score = 192 bits (212), Expect = 7e-44 Identities = 1108/1750 (63%), Gaps = 47/1750 (3%) Strand=Plus/Plus Query 117842 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 117901 ||||||||| || ||||| | |||| |||||| | || | ||||| || | ||||| Sbjct 376759 GTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTT 376818 Query 117902 GGAGAGGGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG-AAGCG 117958 | ||||| |||| |||| |||||| ||| |||||||| ||| |||| Sbjct 376819 ACCCATAGTTGGGTTCTTTAAGTGAAT--GTTCATTGATTGAGATTGATCAATGTAAGCA 376876 Query 117959 TCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTG 118016 || | ||| || ||||||||||| | ||| | ||| ||||||| || ||| || Sbjct 376877 -CCTCTATCAGCAGCCATATCAATAATGCTCTT--TTGTGAAATTTCCCAGACTGTCTTG 376933 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTG 118076 || | ||||| | || ||||| || | | | ||||| || || ||| | | Sbjct 376934 TATAATTTCTTTAATTCGTCTGGAATGTTCGGTAAGTTTTGAATAGAGCCATTATCTTGA 376993 Query 118077 ACCATGAGATCCTTCATATCCTTTGACCAGAGACC--AATCTTTTTGAGATCCTCCACGA 118134 | |||| || ||||||| | | ||| ||||| |||| | | || | | Sbjct 376994 ATGATGAAATTCTTCATAGCATCGCTCCATAGACCTAAATCAACTAAATCTCTTAGCAAA 377053 Query 118135 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 118194 ||| | |||||| || ||||| || || | ||| || || || | | Sbjct 377054 TATGGGT--TGACAATTTGGAATTCACCTGCTAGAACTCTTCTTGAGTAAATGTTAGAAG 377111 Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254 ||||||| || |||||||| |||| |||||| ||||| | || || || || ||||| | Sbjct 377112 TGTATGGTTCGAAGCACTCGTTGTAACCCAAAATTTGTGAAGTTGAAGCAGTAGGCATTG 377171 Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314 | |||| | | ||| | | ||| | | ||| | |||||| | |||| Sbjct 377172 GAGCCAGCAATAAAGAGTTTCTCAAACCGTGCTTGGAAATTCTTTCCTTTAATAGATCCC 377231 Query 118315 AGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATA--TCAAACTGGAGGATACCTTGG 118370 | || || | || ||| || | | || |||| || || || | | |||||| Sbjct 377232 AATCCCATAAATCAG--TTGGCTTCT--TACCCCATAAGTCGAATTGTAATAGACCTTGA 377287 Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC----GGA 118426 || ||||| || || | || |||||||||| || || | | |||||| | | Sbjct 377288 GAAGCTGGAGAACCTTGGAAATTCTCATATGGCCCATCTAAGATTGACAATTCAATCGAA 377347 Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGC 118486 ||| || | || || || ||||| ||||||||||| || |||| || |||| Sbjct 377348 GCT----TCTAAAGCAGCATGGTACATGGTTTCAAAAATTTGAATGTTCAAGTCCCTGGC 377403 Query 118487 CTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 118546 ||| ||||||||| | | || | || || || || || | |||||| ||||| Sbjct 377404 CTCTGGGGAATCAAATGGTAATCTCAATTGCATGAAAACGTCAGCCAAACCTTGAACACC 377463 Query 118547 GAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATT 118606 | ||||||| | | | |||| ||||| | | ||| || || || ||| | || Sbjct 377464 AACAGCAATTGGTCTGTTTTTCATGTTAGATGTTCTAGCCTCTTCAACAGGGTAATAGTT 377523 Query 118607 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 118666 || || || | | | || | || || | |||||||| || | |||||| || ||||| Sbjct 377524 TCTGTCAATGATCATGTTCAAGTTCTTAGCAACAACCTTAGTAACTTCATGCAGTTTTTC 377583 Query 118667 GTAATCAAAACTGCGAGTCTCT---TC--ATT-GACATACTTAGGAAGGGCGATTGACGC 118720 | | | | | | |||| || ||| ||| | ||| | || | || || Sbjct 377584 AAAGTTATACCATGATGACTCTGAATCCGATTCGACGAATGCAGGCAAAGCCACGGAAGC 377643 Query 118721 CAGATTACACACAGAGGTCTCATCCTTATCAGTG-TACTCTATAATTTCCGTGCACAAGT 118779 || ||||| || | || || | | || || || | |||||| |||||||| Sbjct 377644 TAGGTTACAGACGGCAACTTCTTC-TGGTGAGGAATATTCAACAATTTCACAGCACAAGT 377702 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | || |||||| || |||||||||||||| || || ||| ||||| |||||||||| Sbjct 377703 TAGATGACTTAATAGTACCCAAGTTCTTTTGGTTGGATTTTTCATTACAAGCATCCTTGT 377762 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGG 118899 | | ||| |||| || || || |||||||| | | | |||||| | ||| | | Sbjct 377763 ATAACATAAATGGAGTGCCTGTTTCCGTTTGTGCTTCTAAAATAGCATACCATAGCTTTT 377822 Query 118900 CAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAA 118959 ||| ||||| | ||| || ||||| || || || || || | ||||||| Sbjct 377823 GAGCCTTGACAGTTTGTCTACCTCTGCCTTCTTCTTCATATTTGGTATATAAAGCTTCAA 377882 Query 118960 ACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATT 119019 | || ||||| || | || || || | ||| |||| | || ||||| Sbjct 377883 ATTCATCACCGTAAAGTTCGTGTAAACCAGGGGCTTCGGAAGGGGAGAATAAAGTCCATT 377942 Query 119020 GACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGAT 119079 || || || |||||| | |||||| || | ||||| ||||| | |||| ||| |||| Sbjct 377943 GAGCATTCTGCTCAACTCTCTTCATAAACAAATCTGGAATCCATAAGGCCGGGAATAGAT 378002 Query 119080 CCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATA 119138 | | | | || || |||| | || ||||| | | || | || || | |||| Sbjct 378003 CTCTAGCTCTGATCT-CTTCCTTACCGTGATTCTTTCTAATATCGATGAAATCAAAGATA 378061 Query 119139 TCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACCAGCCTG 119194 || | ||||| ||||| | ||| | |||| | || ||| | ||| |||| Sbjct 378062 TCAGAATGCCATGGTTCAATGTATAAAGCGAAAGCACCTGGTCTTTTGTT-ACCCCCCTG 378120 Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254 || ||||| || |||||| ||| || || | || ||||||||||||||| | || Sbjct 378121 GTCAACATATCTTGCAGTGTTGTTGAAAACTCTAATCATTGGAATGATACCGTTAGAAGT 378180 Query 119255 GCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAAT 119314 ||||| || || |||| || | | | ||| | | || ||||| | |||||| Sbjct 378181 ACCATTAGTACCGGCAATATATGAACCAGTAGATCTAATGTTATGAATGTGTAAACCAAT 378240 Query 119315 ACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGAT 119374 ||| || || ||| || || || || | | | | | | | || || |||||||| Sbjct 378241 ACCACCAGCAGTCTTGGAAATCAAAGCACATTGCTTCAAAGTATCATAAATACCATCGAT 378300 Query 119375 CGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAG 119433 || || | || | || | | ||||| |||||||| || || || ||||||| Sbjct 378301 AGAATCGTCTTTCATAGCAACTAAAAAGCATGAAGACATTTG-TGCGTGAGGAGTACCAG 378359 Query 119434 CGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCT 119493 | || || | ||||||| ||||| | || | || ||||| | || || || | Sbjct 378360 CATTAAATAATGTTGGTGAAGCGTGAGTAAAGTATCTTTCTGACATGTAGTTATAAGTTT 378419 Query 119494 CCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATT 119553 | | ||| | ||| | || ||||| ||||| || || || | ||||| | || | Sbjct 378420 CTATGACCTTAGCAATATTATCACCGTGGATACCAATAGAAACTCTCATAACTAAGTGCT 378479 Query 119554 GGGGTGTTTC 119563 | ||| |||| Sbjct 378480 GTGGTCTTTC 378489 >seq1 Length=3681944 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || |||| |||||| |||| || ||||| || | || || | |||||| | Sbjct 1060162 ATCGATGCCAAATTACAAACAGCTGTTTCATCTTTCGATGAATATTCAACAATTTCACAG 1060221 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 || |||||||| ||||| || ||||| ||||||||||| ||||| ||| || ||| Sbjct 1060222 CATAAGTTTGATGATTTAATTGTACCCAAATTCTTTTGATTCGACTTCACGTTGCAGGCA 1060281 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 || || || | || | |||| | || || ||||||||||| Sbjct 1060282 TCTTTATACAACAAGAATGGATTTCCAGTTTCCGTTTGGGA 1060322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434952625920