Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 288 1e-72 seq1 96.9 4e-15 >seq5 Length=1013952 Score = 288 bits (318), Expect = 1e-72 Identities = 1127/1749 (64%), Gaps = 45/1749 (3%) Strand=Plus/Minus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| |||||| || | | ||| | || | || ||||| || || || | |||| | Sbjct 378489 GAAAGACCACAGCACTTAGTTATGAGAGTTTCTATTGGTATCCACGGTGATAATATTGCT 378430 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 104335 ||| | || || || || | ||||| || | || | |||||| ||||||| Sbjct 378429 AAGGTCATAGAAACTTATAACTACATGTCAGAAAGATACTTTACTCACGCTTCACCAACA 378370 Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395 | || ||||||||||| || | |||||||| ||||| | | || | || Sbjct 378369 TTATTTAATGCTGGTACTCCTCACGCACAAATGTCTTCATGCTTTTTAGTTGCTATGAAA 378310 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 || || || ||| | ||||| |||| ||| | | | | ||||| || || ||| Sbjct 378309 GACGATTCTATCGATGGTATTTATGATACTTTGAAGCAATGTGCTTTGATTTCCAAGACT 378250 Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 ||||| |||||||| | ||||| ||| | | ||| | | | || |||| || Sbjct 378249 GCTGGTGGTATTGGTTTACACATTCATAACATTAGATCTACTGGTTCATATATTGCCGGT 378190 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || |||||| || | ||||| ||||||||| || | || || ||| ||| || | Sbjct 378189 ACTAATGGTACTTCTAACGGTATCATTCCAATGATTAGAGTTTTCAACAACACTGCAAGA 378130 Query 104576 TATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATG 104631 ||||| | || | ||| | |||| || || |||| | || |||| ||||| Sbjct 378129 TATGTTGACCAGGG-GGGTAACAAAAGACCAGGTGCTTTCGCTTTATACATTGAACCATG 378071 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 ||| | |||||| | || ||| | || | | || || ||| | || ||| | Sbjct 378070 GCATTCTGATATCTTTGATTTCATCGATATTAGAAAGAATCACGGTAAGGAAGAGAT-CA 378012 Query 104692 GTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | || | ||||| ||| | || | |||||||||||| | || ||||||||||||||| Sbjct 378011 GAGCTAGAGATCTATTCCCGGCCTTATGGATTCCAGATTTGTTTATGAAGAGAGTTGAGC 377952 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 ||| || | ||| || | || | || | | || |||||| | ||| | Sbjct 377951 AGAATGCTCAATGGACTTTATTCTCCCCTTCCGAAGCCCCTGGTTTACACGAACTTTACG 377892 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 |||| || |||||||| | || || || || || |||||||| | | | || | Sbjct 377891 GTGATGAATTTGAAGCTTTATATACCAAATATGAAGAAGAAGGCAGAGGTAGACAAACTG 377832 Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | ||| | | ||| | |||||| | | | ||||| || || || || |||| Sbjct 377831 TCAAGGCTCAAAAGCTATGGTATGCTATTTTAGAAGCACAAACGGAAACAGGCACTCCAT 377772 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 ||| | ||||| || || ||||| |||| || |||||||| |||||| || | Sbjct 377771 TTATGTTATACAAGGATGCTTGTAATGAAAAATCCAACCAAAAGAACTTGGGTACTATTA 377712 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAAT-TTACAGACAAAGATGAGACGGCTGTG 105049 || || || | || ||||| | |||| || | || | || || || || Sbjct 377711 AGTCATCTAACTTGTGCTGTGAAATTGTTGAATATTCCTCACCA-GAAGAAGTTGCCGTC 377653 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT---- 105105 |||||||| || || | ||| | || | || || | || || || ||| Sbjct 377652 TGTAACCTAGCTTCCGTGGCTTTGCCTGCATTCGTCGAATCGGATTCAGAGTCATCATGG 377593 Query 105106 --TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 | | | ||||||||| || |||||||| || ||| | || ||| | |||| | Sbjct 377592 TATAACTTTGAAAAACTGCATGAAGTTACTAAGGTTGTTGCTAAGAACTTGAACATGATC 377533 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 ||||| ||||| | |||||| ||||| ||| | | |||||| |||| | || | ||| Sbjct 377532 ATTGACAGAAACTATTACCCTGTTGAAGAGGCTAGAACATCTAACATGAAAAACAGACCA 377473 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCT-TTGTCGCCACGCATTTGA 105282 |||| | | |||||||| ||| | || || || ||||| | ||| || ||||||| Sbjct 377472 ATTGCTGTTGGTGTTCAAGGTTTGGCTGACGTTTTCATGCAATTGAGATTAC-CATTTGA 377414 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 |||| || || | ||| | || | || ||||| |||||||| || || ||| | Sbjct 377413 TTCCCCAGAGGCCAGGGACTTGAACATTCAAATTTTTGAAACCATGTACCATGCTGCTTT 377354 Query 105343 TGAGGCGAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 || || ||| || ||| || | ||||| |||||||| | || | ||||| Sbjct 377353 AGAAGC---TTCGATTGAATTGTCAATCTTAGATGGGCCATATGAGAATTTCCAAGGTTC 377297 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGA--TATGTGGGAAGGTGAGACCAA--GCTTC 105455 ||||||||| ||||| | | ||||| || |||| || || || |||| | || Sbjct 377296 TCCAGCTTCTCAAGGTCTATTACAATTCGACTTATGGGGTAA---GAAGCCAACTGATTT 377240 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | | || ||||| | |||||| | || || | ||| | | ||| | | Sbjct 377239 A-TGGGATTGGGATCTATTAAAGGAAAGAATTTCCAAGCACGGTTTGAGAAACTCTTTAT 377181 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | ||||||||||||| || || || || ||||||| |||||| | || || ||||| | Sbjct 377180 TGCTGGCTCCAATGCCTACTGCTTCAACTTCACAAATTTTGGGTTACAACGAGTGCTTCG 377121 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 |||| ||||| | ||||| || |||||| || || || || || ||||||| Sbjct 377120 AACCATACACTTCTAACATTTACTCAAGAAGAGTTCTAGCAGGTGAATTCCAAATTGTCA 377061 Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATT--GGTCTCTGGTCCAAGGATATGAAGGA 105693 || ||| | | || | | |||| ||||| ||| | | | ||||||| | Sbjct 377060 AC--CCATATTTGCTAAGAGATTTAGTTGATTTAGGTCTATGGAGCGATGCTATGAAGAA 377003 Query 105694 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAA 105753 | |||| | ||| ||| || |||||||| | | | |||||| | ||| | || Sbjct 377002 TTTCATCATTCAAGATAATGGCTCTATTCAAAACTTACCGAACATTCCAGACGAATTAAA 376943 Query 105754 GAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCA 105811 ||| || ||| ||||| ||||||| ||| | ||| | ||||| ||||| || Sbjct 376942 GAAATTATACAAGACAGTCTGGGAAATTTCACAA--AAGAGCATTATTGATATGGCTGCT 376885 Query 105812 GATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAG--TCCA 105868 ||| | ||| |||| |||||||||| |||| ||||| |||| |||| ||| Sbjct 376884 GATAGAGGT-GCTTACATTGATCAATCTCAATCAATGAA--CATTCACTTAAAGAACCCA 376828 Query 105869 ACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGG 105928 || ||| ||| | | || |||||| | ||| |||||||||||||| | || || || Sbjct 376827 ACTATGGGTAAGTTAACGTCCATGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGT 376768 Query 105929 ATGTATTAC 105937 ||||| ||| Sbjct 376767 ATGTACTAC 376759 >seq1 Length=3681944 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753 |||||| | ||||||||||||||||| |||| || | || |||||| | || || Sbjct 2805866 CTTTCCGATGGCATCAATCTCATCAACAAAGATAATAGAAGGAGCATTTTCTCTGGCAAC 2805925 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9813 || || | || || || | || || |||||||||||||| || ||||| | | Sbjct 2805926 TTTGAACAATTCACGAACTCTAGAAGCACCAACACCAACAAACATTTCAACAAATTCAGA 2805985 Query 9814 GGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9872 | ||| | | || ||| || |||| || ||||| ||| | ||| ||| | |||| Sbjct 2805986 ACCAGAA-ACAGAATAGAATGGAACATCAGCCTCACCAGCAGTTGCTTTGGCTAACAGAG 2806044 Query 9873 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 ||||||| |||||||| ||| | | | |||||||| |||||||| ||||| Sbjct 2806045 TCTTACCGGTACCTGGAGGACCTGATAAAATGGCACCTCTCGGAATCTTAGCGCC 2806099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260566695680