Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq5 288 1e-72
seq1 96.9 4e-15
>seq5
Length=1013952
Score = 288 bits (318), Expect = 1e-72
Identities = 1127/1749 (64%), Gaps = 45/1749 (3%)
Strand=Plus/Minus
Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275
|||| |||||| || | | ||| | || | || ||||| || || || | |||| |
Sbjct 378489 GAAAGACCACAGCACTTAGTTATGAGAGTTTCTATTGGTATCCACGGTGATAATATTGCT 378430
Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 104335
||| | || || || || | ||||| || | || | |||||| |||||||
Sbjct 378429 AAGGTCATAGAAACTTATAACTACATGTCAGAAAGATACTTTACTCACGCTTCACCAACA 378370
Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395
| || ||||||||||| || | |||||||| ||||| | | || | ||
Sbjct 378369 TTATTTAATGCTGGTACTCCTCACGCACAAATGTCTTCATGCTTTTTAGTTGCTATGAAA 378310
Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455
|| || || ||| | ||||| |||| ||| | | | | ||||| || || |||
Sbjct 378309 GACGATTCTATCGATGGTATTTATGATACTTTGAAGCAATGTGCTTTGATTTCCAAGACT 378250
Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515
||||| |||||||| | ||||| ||| | | ||| | | | || |||| ||
Sbjct 378249 GCTGGTGGTATTGGTTTACACATTCATAACATTAGATCTACTGGTTCATATATTGCCGGT 378190
Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575
|| |||||| || | ||||| ||||||||| || | || || ||| ||| || |
Sbjct 378189 ACTAATGGTACTTCTAACGGTATCATTCCAATGATTAGAGTTTTCAACAACACTGCAAGA 378130
Query 104576 TATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATG 104631
||||| | || | ||| | |||| || || |||| | || |||| |||||
Sbjct 378129 TATGTTGACCAGGG-GGGTAACAAAAGACCAGGTGCTTTCGCTTTATACATTGAACCATG 378071
Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691
||| | |||||| | || ||| | || | | || || ||| | || ||| |
Sbjct 378070 GCATTCTGATATCTTTGATTTCATCGATATTAGAAAGAATCACGGTAAGGAAGAGAT-CA 378012
Query 104692 GTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750
| || | ||||| ||| | || | |||||||||||| | || |||||||||||||||
Sbjct 378011 GAGCTAGAGATCTATTCCCGGCCTTATGGATTCCAGATTTGTTTATGAAGAGAGTTGAGC 377952
Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810
||| || | ||| || | || | || | | || |||||| | ||| |
Sbjct 377951 AGAATGCTCAATGGACTTTATTCTCCCCTTCCGAAGCCCCTGGTTTACACGAACTTTACG 377892
Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870
|||| || |||||||| | || || || || || |||||||| | | | || |
Sbjct 377891 GTGATGAATTTGAAGCTTTATATACCAAATATGAAGAAGAAGGCAGAGGTAGACAAACTG 377832
Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| ||| | | ||| | |||||| | | | ||||| || || || || ||||
Sbjct 377831 TCAAGGCTCAAAAGCTATGGTATGCTATTTTAGAAGCACAAACGGAAACAGGCACTCCAT 377772
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
||| | ||||| || || ||||| |||| || |||||||| |||||| || |
Sbjct 377771 TTATGTTATACAAGGATGCTTGTAATGAAAAATCCAACCAAAAGAACTTGGGTACTATTA 377712
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAAT-TTACAGACAAAGATGAGACGGCTGTG 105049
|| || || | || ||||| | |||| || | || | || || || ||
Sbjct 377711 AGTCATCTAACTTGTGCTGTGAAATTGTTGAATATTCCTCACCA-GAAGAAGTTGCCGTC 377653
Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT---- 105105
|||||||| || || | ||| | || | || || | || || || |||
Sbjct 377652 TGTAACCTAGCTTCCGTGGCTTTGCCTGCATTCGTCGAATCGGATTCAGAGTCATCATGG 377593
Query 105106 --TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163
| | | ||||||||| || |||||||| || ||| | || ||| | |||| |
Sbjct 377592 TATAACTTTGAAAAACTGCATGAAGTTACTAAGGTTGTTGCTAAGAACTTGAACATGATC 377533
Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223
||||| ||||| | |||||| ||||| ||| | | |||||| |||| | || | |||
Sbjct 377532 ATTGACAGAAACTATTACCCTGTTGAAGAGGCTAGAACATCTAACATGAAAAACAGACCA 377473
Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCT-TTGTCGCCACGCATTTGA 105282
|||| | | |||||||| ||| | || || || ||||| | ||| || |||||||
Sbjct 377472 ATTGCTGTTGGTGTTCAAGGTTTGGCTGACGTTTTCATGCAATTGAGATTAC-CATTTGA 377414
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
|||| || || | ||| | || | || ||||| |||||||| || || ||| |
Sbjct 377413 TTCCCCAGAGGCCAGGGACTTGAACATTCAAATTTTTGAAACCATGTACCATGCTGCTTT 377354
Query 105343 TGAGGCGAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399
|| || ||| || ||| || | ||||| |||||||| | || | |||||
Sbjct 377353 AGAAGC---TTCGATTGAATTGTCAATCTTAGATGGGCCATATGAGAATTTCCAAGGTTC 377297
Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGA--TATGTGGGAAGGTGAGACCAA--GCTTC 105455
||||||||| ||||| | | ||||| || |||| || || || |||| | ||
Sbjct 377296 TCCAGCTTCTCAAGGTCTATTACAATTCGACTTATGGGGTAA---GAAGCCAACTGATTT 377240
Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515
| | || ||||| | |||||| | || || | ||| | | ||| | |
Sbjct 377239 A-TGGGATTGGGATCTATTAAAGGAAAGAATTTCCAAGCACGGTTTGAGAAACTCTTTAT 377181
Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575
| ||||||||||||| || || || || ||||||| |||||| | || || ||||| |
Sbjct 377180 TGCTGGCTCCAATGCCTACTGCTTCAACTTCACAAATTTTGGGTTACAACGAGTGCTTCG 377121
Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635
|||| ||||| | ||||| || |||||| || || || || || |||||||
Sbjct 377120 AACCATACACTTCTAACATTTACTCAAGAAGAGTTCTAGCAGGTGAATTCCAAATTGTCA 377061
Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATT--GGTCTCTGGTCCAAGGATATGAAGGA 105693
|| ||| | | || | | |||| ||||| ||| | | | ||||||| |
Sbjct 377060 AC--CCATATTTGCTAAGAGATTTAGTTGATTTAGGTCTATGGAGCGATGCTATGAAGAA 377003
Query 105694 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAA 105753
| |||| | ||| ||| || |||||||| | | | |||||| | ||| | ||
Sbjct 377002 TTTCATCATTCAAGATAATGGCTCTATTCAAAACTTACCGAACATTCCAGACGAATTAAA 376943
Query 105754 GAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCA 105811
||| || ||| ||||| ||||||| ||| | ||| | ||||| ||||| ||
Sbjct 376942 GAAATTATACAAGACAGTCTGGGAAATTTCACAA--AAGAGCATTATTGATATGGCTGCT 376885
Query 105812 GATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAG--TCCA 105868
||| | ||| |||| |||||||||| |||| ||||| |||| |||| |||
Sbjct 376884 GATAGAGGT-GCTTACATTGATCAATCTCAATCAATGAA--CATTCACTTAAAGAACCCA 376828
Query 105869 ACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGG 105928
|| ||| ||| | | || |||||| | ||| |||||||||||||| | || || ||
Sbjct 376827 ACTATGGGTAAGTTAACGTCCATGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGT 376768
Query 105929 ATGTATTAC 105937
||||| |||
Sbjct 376767 ATGTACTAC 376759
>seq1
Length=3681944
Score = 96.9 bits (106), Expect = 4e-15
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753
|||||| | ||||||||||||||||| |||| || | || |||||| | || ||
Sbjct 2805866 CTTTCCGATGGCATCAATCTCATCAACAAAGATAATAGAAGGAGCATTTTCTCTGGCAAC 2805925
Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9813
|| || | || || || | || || |||||||||||||| || ||||| | |
Sbjct 2805926 TTTGAACAATTCACGAACTCTAGAAGCACCAACACCAACAAACATTTCAACAAATTCAGA 2805985
Query 9814 GGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9872
| ||| | | || ||| || |||| || ||||| ||| | ||| ||| | ||||
Sbjct 2805986 ACCAGAA-ACAGAATAGAATGGAACATCAGCCTCACCAGCAGTTGCTTTGGCTAACAGAG 2806044
Query 9873 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
||||||| |||||||| ||| | | | |||||||| |||||||| |||||
Sbjct 2806045 TCTTACCGGTACCTGGAGGACCTGATAAAATGGCACCTCTCGGAATCTTAGCGCC 2806099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260566695680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |