Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 95.1 1e-14
>seq5
Length=1013952
Score = 95.1 bits (104), Expect = 1e-14
Identities = 197/289 (68%), Gaps = 6/289 (2%)
Strand=Plus/Minus
Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472
|||||||| | |||||| | | || ||||||||||| || || || || |||||||||
Sbjct 378173 ACGGTATCATTCCAATGATTAGAGTTTTCAACAACACTGCAAGATATGTTGACCAGGGGG 378114
Query 19473 GCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530
| |||| | || | ||| ||||| | ||| | || |||||||| | || || |
Sbjct 378113 GTAACAAAAGACCAGGTGCT--TTCGCTTTATACATTGAACCATGGCATTCTGATATCTT 378056
Query 19531 GGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTT 19590
|||||| |||| | | ||| || ||| | || ||||| | | | || || ||
Sbjct 378055 TGATTTCATCGATATTAGAAAGAATCACGGTAAGGAAGAGATCAGAGCTAGAGATCTATT 377996
Query 19591 CACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCA 19650
| ||||||| |||||||| || | || ||| ||| |||||| || | | ||||| |
Sbjct 377995 CCCGGCCTTATGGATTCCAGATTTGTTTATGAAGAGAGTTGAGCAGAATGCTCAATGG-A 377937
Query 19651 CCTGA-TGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698
| | | | | ||| |||| |||||| ||| ||| | ||||| ||
Sbjct 377936 CTTTATTCTCCCCTTCCGAAGCCCCTGGTTTACACGAACTTTACGGTGA 377888
Score = 89.7 bits (98), Expect = 6e-13
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247
|||||| || |||||||| || ||||| | |||||||||||| ||||| | ||||||
Sbjct 376749 GTGTTCTTAAGTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATGG 376808
Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307
|| | ||| ||| | | ||||||| | | ||||| | || || || || || |
Sbjct 376809 ACGTTAACTTACCCATAGTTGGGTTCTTTAAGTGAATGTTCATTGATTGAGATTGATCAA 376868
Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGA 78364
|||| ||||| | || || ||||| || || | |||||| | ||| |||||||
Sbjct 376869 TGTAAGCACCTCTATCAGCAGCCATATCAATAATGCTCTTTTGTGAAATTTCCCAGA 376925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524580590080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |