Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5 111 2e-19 >seq5 Length=1013952 Score = 111 bits (122), Expect = 2e-19 Identities = 137/186 (74%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 55730 AAGGAGATT-TACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGC 55788 || || ||| ||| ||| || ||||| ||| |||| ||||| | ||||| ||| ||| Sbjct 376945 AAAGAAATTATACAAGACAGTCTGGGAAATTTCACAAAAGAGCATTATTGATATGGCTGC 376886 Query 55789 TGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTC 55848 |||| | ||||| ||||| || || || || || ||||||| | | |||| || | Sbjct 376885 TGATAGAGGTGCTTACATTGATCAATCTCAATCAATGAACATTCACTTAAAGAACCCAAC 376826 Query 55849 ACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTAT 55908 ||| ||||| | || |||||||| ||||| ||||||||||| | ||||| ||||| Sbjct 376825 TATGGGTAAGTTAACGTCCATGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTAT 376766 Query 55909 GTACTA 55914 |||||| Sbjct 376765 GTACTA 376760 Score = 107 bits (118), Expect = 2e-18 Identities = 272/410 (66%), Gaps = 9/410 (2%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||||||||| | ||||||||||| || || | | ||| ||||| || || | ||| Sbjct 647695 CCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTT 647636 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 |||||||||||||| | | || |||||| ||||||||| ||||||||| |||||| Sbjct 647635 TTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAG 647576 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCA---TCGGAAGTCATCCAAGTCTGAGCCCATTCA 74945 || || | | || ||||| || ||| ||||||| || ||||| ||| Sbjct 647575 GCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGTCA 647516 Query 74946 GCTTTTCGTTTGACCGCAGGGACAGTATCGATCGC-TTG--GAAGAGGCTTGCCTTCTCT 75002 || ||| |||| ||| | ||| || || || ||| |||| | |||| || | Sbjct 647515 GCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTT 647456 Query 75003 TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCG 75062 |||||||| || |||| |||| | |||||| || || || || || || Sbjct 647455 ---GGATCCTTAACATAGGTGTCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCC 647399 Query 75063 TTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAA 75122 | | |||| | |||||||| || || |||| ||| || || || ||||| Sbjct 647398 ATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAG 647339 Query 75123 TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGC 75172 || | | ||||| | || || ||||| ||||| || || ||||| Sbjct 647338 TTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGC 647289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215781113600