Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 9e-27
seq2 111 4e-19
seq6 95.1 3e-14
>seq1
Length=3681944
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | ||| | ||||| || ||||| ||||| || || | | ||| || ||
Sbjct 1219123 TCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACC 1219182
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | |||||| ||||| |||| ||||||||
Sbjct 1219183 ATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 1219242
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || |||||||| ||| ||| ||||| | ||||||
Sbjct 1219243 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGACCTCTAAAGTGAT 1219302
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTT 211116
||||| || || | || || || || | |||||||
Sbjct 1219303 GGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATTT 1219340
>seq2
Length=3419278
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | ||| || || ||||||||||| || || | | || || ||
Sbjct 1617103 TCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 1617162
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| | ||||| || || ||||| | | ||||| ||||| || | ||||||||
Sbjct 1617163 ATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGGATACCTTCCTT 1617222
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| ||||||||| || ||||| || || ||||| || ||| ||||| | ||||||
Sbjct 1617223 ATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACCTCTAAAGTGAT 1617282
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | || || || || | ||||| ||
Sbjct 1617283 GGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATCTT 1617321
>seq6
Length=821682
Score = 95.1 bits (104), Expect = 3e-14
Identities = 127/174 (73%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 139810 CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAA 139869
||||||||||| || ||||| || ||||||||| ||||||| | ||| | || | |||
Sbjct 428727 CCAAAGAAGCATGGTAGAGGTGGTCAATCTGCTTTGCGTTTCGCCAGATTGAGAGATGAA 428786
Query 139870 AAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAAGAC 139929
||||| || || || | |||||||||||||| || | ||| ||| || | ||
Sbjct 428787 AAGAGACATAATTATGTTAGAAAAGTTGCAGAAGTTGCTGTTCAGAATTTCATAACTAAC 428846
Query 139930 AAC-AAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGAC 139982
|| ||||| |||| ||||| | |||| || ||||| || || ||||||||
Sbjct 428847 GACAAAGTG-AATGTTGCTGGTTTAATTTTAGCCGGTTCAGCTGATTTCAAGAC 428899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151524747680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |