Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 4e-25
seq2 125 5e-24
seq9 86.0 4e-12
>seq1
Length=3681944
Score = 129 bits (142), Expect = 4e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23609 AAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCA 23668
||||||| ||||||||||||||| | || || || || |||||| | || || || |||
Sbjct 1219340 AAATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCT 1219281
Query 23669 CGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| |||| ||| | || | || || ||||| |||||| | || || |||
Sbjct 1219280 CAGACACCATTGACAATGTCAAGTC-CAAGATCCAAGACAAGGAAGGTATTCCACCTGAT 1219222
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
||||| | ||||| ||||| || || ||| ||||||| | | || ||| || |||
Sbjct 1219221 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTAC 1219162
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||| ||||| || ||||| || || ||||| ||||| || |||| ||
Sbjct 1219161 AACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 1219112
>seq2
Length=3419278
Score = 125 bits (138), Expect = 5e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||| ||||||||||||||| | || || || || |||||| | || || || ||
Sbjct 1617321 AAGATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCA 1617262
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| |||||| |||| || |||| | ||| || || || |||||| | || || ||
Sbjct 1617261 TCCGACACTATTGACAACGTTAAGTC-AAAGATCCAAGATAAGGAAGGTATCCCACCTGA 1617203
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||||||| | ||||| ||||| || || ||| | ||||| | | |||||| ||| ||
Sbjct 1617202 TCAACAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTA 1617143
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| || || || ||||| || || || || || |||| ||
Sbjct 1617142 CAACATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATTAAGAGGTGG 1617092
>seq9
Length=470967
Score = 86.0 bits (94), Expect = 4e-12
Identities = 117/161 (73%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||| |||||||||||||| | || || || || ||||| | || ||||| ||
Sbjct 292512 AACATGCAAATTTTCGTTAAAACTTTAACTGGTAAGACCATCACCTTAGAGGTTGAATCT 292453
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| || ||| |||| ||| | || | ||||| || || |||||| | || || ||
Sbjct 292452 TCCGATACTATTGATAATGTGAAGTC-GAAAATCCAAGATAAGGAAGGTATTCCACCTGA 292394
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG 23767
|||||| | ||||| ||||| || |||||| | |||||||
Sbjct 292393 TCAACAAAGATTAATCTTTGCTGGTAAACAATTAGAAGACG 292353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009468176256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |