Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 172 1e-37
seq2 165 2e-35
seq9 127 5e-24
>seq1
Length=3681944
Score = 172 bits (190), Expect = 1e-37
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| | ||| | ||| | |||||||| ||||| | ||||| || | || ||||| ||
Sbjct 1219123 TCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACC 1219182
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || |||||| || || ||||||||||||||
Sbjct 1219183 ATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 1219242
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || ||||||||||||| ||| || ||||| |||||
Sbjct 1219243 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGACCTCTAAAGTGAT 1219302
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTT 225715
||||| || || || ||||| | ||| | ||||||||
Sbjct 1219303 GGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATTT 1219340
>seq2
Length=3419278
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||| ||||| ||||||| ||||| |||| |||||||| ||
Sbjct 1617103 TCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 1617162
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||| ||||| ||||| ||||| | || ||||| || || || |||||||||||
Sbjct 1617163 ATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGGATACCTTCCTT 1617222
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| || || || ||||| || | ||| || ||||| |||||
Sbjct 1617223 ATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACCTCTAAAGTGAT 1617282
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || || ||||| | ||| | |||||| ||
Sbjct 1617283 GGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATCTT 1617321
Score = 107 bits (118), Expect = 5e-18
Identities = 89/109 (82%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||||||||| || ||||| || || || ||||||||||||||||||||
Sbjct 2643590 GAAGATTTGACCATCAGTAATGGAAATAACGTTAGTTGGAATATAAGCAGAAACATCACC 2643649
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
|||| ||||| | || ||||| || |||| || |||||||| |||
Sbjct 2643650 ACCTTGGGTTTCAATGACTGGTAAAGCAGTTAAGGAACCACCACCTAAA 2643698
>seq9
Length=470967
Score = 127 bits (140), Expect = 5e-24
Identities = 130/170 (76%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 225547 AAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGA 225606
|| ||||| || ||||||| || || ||||| ||||| | || |||||| || || |||
Sbjct 292343 AATGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 292402
Query 225607 ATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACG 225666
||||||||||| |||||||| || ||||||| || || || || || | ||| ||
Sbjct 292403 ATACCTTCCTTATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCAACC 292462
Query 225667 TCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| ||||| || || |||||||| | ||| | |||||| ||
Sbjct 292463 TCTAAGGTGATGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCATGTT 292512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530711062208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |