Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq5 318 5e-82 >seq5 Length=1013952 Score = 318 bits (352), Expect = 5e-82 Identities = 624/910 (69%), Gaps = 23/910 (3%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| |||||||| ||||| |||| |||||| ||||| || || || || |||| Sbjct 648017 AACACCAGCCTTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAA 647958 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 ||||||||||||||||| || || || || | | ||||| || || | || || Sbjct 647957 AGAAATATTTTCCATAAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTCTTGCAACCTAA 647898 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 || || | |||| ||||| ||||| || | || |||| ||| | ||| ||| || Sbjct 647897 AGATAATAATAATCTATCAGCAACAAACTCAACGTATTGGCACATCAATTCTGCGTTCAT 647838 Query 4427 TCCAATTAATCTCACA-GGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCT 4484 || | |||| |||| |||| || | || || | ||||| ||| || || ||| Sbjct 647837 ACCCAATAATG-CACATGGTAAGGCATCCGTGAAGTATCTCTT-TTCAATGTCAACTGCT 647780 Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544 || || || || | | | |||| | ||| | || | || || ||| Sbjct 647779 TCAGTAATAATCTTGACAACAATTTCTTCATTTGGAGTGTTGTTCATGTGAGAGAATAAT 647720 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| ||||||||| || |||||||| ||||| | ||||| ||| ||||| || ||| Sbjct 647719 AAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTT 647660 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || ||||||| ||||||||||| | |||||| |||| |||||||| ||||| ||| Sbjct 647659 AAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAG 647600 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || || ||||| || || ||||| || ||||||| |||| ||| || || Sbjct 647599 AAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTG 647540 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 || |||||| | | ||||||| ||| |||| ||| | ||| ||||| || | ||||| Sbjct 647539 TTCATCCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCA 647480 Query 4785 TTAAATAA----TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 || ||||| | | | || ||| || | || ||| ||||| || | || Sbjct 647479 TTGAATAAGAAGTCAGCCTCCTT----TGGATCCTTAACATAGGTGTCGATCAATAATGA 647424 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 || ||||||| || || ||||| || ||||| || ||||| || || | ||||| Sbjct 647423 GTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTC 647364 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 || | ||| |||||| | |||| |||| || ||||| ||||| || |||||||| Sbjct 647363 TGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGA 647304 Query 4961 GGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCG---TCAGGCTTAA-- 5013 ||||||||| || || |||| | ||| || ||| | || |||| ||| |||| Sbjct 647303 GGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAAT-CT-TTCGCTTTCA--TTTAATC 647248 Query 5014 GTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACG 5073 || ||||||| | ||| || | |||||||| |||||| ||||||| || || | Sbjct 647247 TGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAG 647188 Query 5074 CTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATC 5133 |||| || || |||||||| ||| || ||| | || | ||| || | | ||||||| Sbjct 647187 CTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAAAACAAATC 647128 Query 5134 TGTTGTCGTT 5143 | || | ||| Sbjct 647127 TTTTTTTGTT 647118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049433450656