Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5 500 1e-136 seq1 141 1e-28 >seq5 Length=1013952 Score = 500 bits (554), Expect = 1e-136 Identities = 1421/2146 (66%), Gaps = 67/2146 (3%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || || ||||| | || ||| || | || ||| | || |||||||||||||| || | | Sbjct 376721 GTGAATTGAATAGCAGCAGAAGCAGCTTGTGTTCTTAAGTAGTACATACCAGTCTTCAAA 376780 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGA-ATAACTAGGATCGGCTAT 76900 ||| |||| |||||||| |||||| || | || ||| | || || || Sbjct 376781 CCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTACCCATAGTTGGGTTCTT-TAA 376839 Query 76901 ATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTAT 76960 ||||| ||||| || ||| |||||| ||| |||| ||||||||||| ||||| | || Sbjct 376840 GTGAATGTTCATTGATTGAGATTGATCAATGTAAGCACCTCTATCAGCAGCCATATCAAT 376899 Query 76961 AATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAA-AACTTGTTTGATATCATCTGGAA 77019 |||| ||||||| | ||||||||| | || ||| | || || ||| || || ||||||| Sbjct 376900 AATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTATAATTTCTTTAAT-TCGTCTGGAA 376958 Query 77020 GGTTTG-TA--TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCAT 77076 ||| | || |||||||| || ||| |||| || || |||||| ||| |||| Sbjct 376959 TGTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATGATGAAATTCTTCATAGCATCGC 377018 Query 77077 TCCACAATTTCCTC--TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTC 77134 |||| | ||| || |||| |||| || | || || || || ||||| ||||| Sbjct 377019 TCCATAGA--CCTAAATCAACTAAATCTCTTAGCAAATATGGGTTGACAATTTGGAATTC 377076 Query 77135 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 77194 || | | ||||| | | |||||| ||| || |||||||| | | || |||| Sbjct 377077 ACCTGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAGCACTCGTTGTA 377136 Query 77195 TCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAG 77254 ||||||||||| | ||| |||||||| ||||| || |||| ||||||| ||||| | Sbjct 377137 ACCCAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAAGAGTTTCTCAA 377196 Query 77255 ACCATGTGTTCTGATTTTATCTTTTAGATATTTCC-AATCCCAAAGATCTGAAGGTACAA 77313 ||| || | ||| | || |||| ||| ||| ||||||| | ||| | || Sbjct 377197 ACCGTGCTTGGAAATTCTTTCCTTTA-ATAGATCCCAATCCCATAAATCAGTTGGCTTCT 377255 Query 77314 CATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCAT 77373 | |||| | ||| |||||| | || | | ||| || || | | | |||| Sbjct 377256 TACCCCATAAGTCGAATTGTAATAGACCTTGAGAAGCTGGAGAACCTTGGAAATTCTCAT 377315 Query 77374 AAGGTCCTTCT--GTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGT 77431 | || || ||| | || | | |||| ||||| || || | | || || || Sbjct 377316 ATGGCCCATCTAAGATTGAC--AATTCAATCGAAGCTTCTAAAGCAGCATGGTACATGGT 377373 Query 77432 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAA- 77490 ||| ||||| | | || | || || || |||||| || |||| | || Sbjct 377374 TTCAAAAATTTGAATGTTCAAGTCCCTGGCCTCTGGGGAATCAAATGG-TAATCTCAATT 377432 Query 77491 GAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGG 77550 | || || | || || || || ||||| |||| | |||| ||||| | | || | || | Sbjct 377433 GCATGAAAACGTCAGCCAAACCTTGAACACCAACAGCAATTGGTCTGTTTTTCATGTTAG 377492 Query 77551 AAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAA 77610 | || |||| ||| || ||| ||||| || |||| || || | || | || || Sbjct 377493 ATGTTCTAGCCTCTTCAACAGGGTAATAGTTTCTGTCAATGATCATGTTCAAGTTCTTAG 377552 Query 77611 CAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT--CTATAA---C 77665 |||| || ||| || || | ||||| ||| | | | | | || || | | | Sbjct 377553 CAACAACCTTAGTAACTTCATGCAGTTTTTCAAAGTTATACCATG-ATGACTCTGAATCC 377611 Query 77666 AA----AC--ATGTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCG 77717 | || ||| |||||| | || ||||| ||||| || || || || | | Sbjct 377612 GATTCGACGAATGCAGGCAAAGCCACGGAAGCTAGGTTACAGACGGCAACTTCTTCTGGT 377671 Query 77718 TTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGT 77777 || ||||| | || || || | ||| | || ||||| |||| || | | Sbjct 377672 GAGGAATATTCAACAATTTCACAGCACAAGTTAGATGACTTAATAGTACCCAAGTTCTTT 377731 Query 77778 TGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATC 77837 |||||| |||| ||| || | ||||| || | ||||| ||||| || ||||| | Sbjct 377732 TGGTTGGATTTTTCATTACAAGCATCCTTGTATAACATAAATGGAGTGCCTGTTTCCGTT 377791 Query 77838 TGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT-ATCATAGA---TTTGTATCG 77893 |||| ||| | ||||| | ||| |||||||| | | | || ||||| | Sbjct 377792 TGTGCTTCTAAAATAGCATACCA--------TAGCTTTTGAGCCTTGACAGTTTGTCTA- 377842 Query 77894 CCTCTCTCTT-----TCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCA 77948 ||||| ||| ||||||| ||||||| |||||||||||| || ||| || Sbjct 377843 CCTCTGCCTTCTTCTTCATATTTGGTATATAAAGCTTCAAATTCATCACCGTAAAGTTCG 377902 Query 77949 TCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGT 78008 | || |||||| ||| ||| | | || | ||| | | ||| | || ||||| Sbjct 377903 TGTAAACCAGGGGCTTCGGAAGGGGAGAATAAAGTCCATTGAGCATTCTGCTCAACTCTC 377962 Query 78009 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCA 78068 |||||||| | ||| || ||||||| || |||||||||| | ||| ||||| Sbjct 377963 TTCATAAACAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCC 378022 Query 78069 TTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 78128 || || ||||||| ||| ||||| || || | |||||||||||||||||||| | Sbjct 378023 TTACCGTGATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGTTCAATG 378082 Query 78129 TATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTA 78188 |||| || | | | || |||| ||| ||||| ||||| || | |||||| || ||||| Sbjct 378083 TATAAAGCGAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCAGTGTTG 378142 Query 78189 TTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 || ||||||| | ||||||||| ||||||||||| || ||||| || || | |||||| Sbjct 378143 TTGAAAACTCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCAATATAT 378202 Query 78249 CTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATT 78308 ||| | | | ||| ||| |||| || || || || || || |||| || || Sbjct 378203 GAACCAGTAGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATC 378262 Query 78309 AGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGA 78368 | ||| || | ||||| ||||| || ||||| || ||| || || |||| || Sbjct 378263 AAAGCACATTGCTTCAAAGTATCATAAATACCATCGATAGAATCGTCTTTCATAGCAACT 378322 Query 78369 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428 | ||| || ||||||||| ||| ||| || |||||||||||||| || || || Sbjct 378323 AAAAAGCATGAAGACATTTGTGCGTGAGGAGTACCAGCATTAAATAATGTTGGTGAAGCG 378382 Query 78429 TGCGTAAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAAT-AGCTGATTCTAT-GTCC 78485 || ||||| || |||| || | |||| || || ||||| || | || | | || | Sbjct 378383 TGAGTAAAGTATCTTTCTGACATGTAG-TTATAAGTTTCTATGACCTTA-GCAATATTAT 378440 Query 78486 CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTA 78545 || | || || || | | || | ||| | | ||||| ||||||||| | | Sbjct 378441 CACCG-TGGATACCAATAGAAACTCTCATAACTAAGTGCTGTGGTCTTTCAGCAACAGCA 378499 Query 78546 TTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 78605 || ||| |||| || |||||| | |||||||| |||||||| ||||||||||| || Sbjct 378500 CCGTTAATTCTCAATAAATATGATCTCTCCAAAGTCTTAAAACCGAAATAGTTGTAGGAG 378559 Query 78606 AAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTAT--CTTTGTATTTGGTAACAATAT 78663 || || | ||||||| |||| ||||||| | || || || || |||| ||| || | Sbjct 378560 AAATCACGGTCGTAAACAATAGCAGAATTCAATTCATCACTATGCTTTTG--AACGATGT 378617 Query 78664 CCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAA 78723 | || | || || || |||| | |||||| || || || | ||| || Sbjct 378618 CGTAAACTTCCTTAGAGATCATTGGAGCCGGCTGACCATTCTTTGGGTTGATATAAGTAT 378677 Query 78724 ATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAG 78783 |||| | ||| || || | |||| |||| |||| | |||||||| ||||| | || Sbjct 378678 ATAATTGTTCAATAACTGAAGAAAATTGTTTGGTTGTCTGCTTGTGTAAGTTAGAAATAG 378737 Query 78784 CTATTCTTGCAGCTAGAATAGCATAATCAGGATG-TTG--TGTAGTACAAGTGGCTGCTA 78840 ||||||| ||||||| | |||||||| || || || ||| || || || || Sbjct 378738 CTATTCTGGCAGCTAAGGTGGCATAATCTGGGTGAATGGTTGTCATATAA---GCAGCAG 378794 Query 78841 TTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 |||| || || || |||| || || ||||| || || || ||||| Sbjct 378795 TTTCAGCAGCCAAGTTATCCAATTCGATAGTGGTAACACCGTTATA 378840 Score = 250 bits (276), Expect = 3e-61 Identities = 416/598 (70%), Gaps = 6/598 (1%) Strand=Plus/Minus Query 48137 TAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 48196 |||||| ||||||||| || | |||||||||||||| ||| ||||| ||||| || || Sbjct 647720 TAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGT 647661 Query 48197 GAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAA 48256 | || |||||||| || | ||||| | |||||| || | || || || ||||| || Sbjct 647660 TAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAA 647601 Query 48257 GAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCG--TAA-CTGGCTTCGTT 48313 ||| || ||||| || || ||||| || | ||| || || ||| | |||||| Sbjct 647600 GAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTT 647541 Query 48314 GTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGC 48373 || ||||| | ||||| |||||||| | ||| | ||||| || || || ||||| Sbjct 647540 GTTCATCCATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGC 647481 Query 48374 ATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433 ||| || | |||| || || ||| ||||| || || || || || | || Sbjct 647480 ATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATCAATAATGAGTA 647421 Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493 |||| ||||| || ||||| || ||||| || ||||| ||||| | ||||||| Sbjct 647420 AGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGG 647361 Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGC 48553 || || || || | | |||| |||| |||| ||||| || || || || || || Sbjct 647360 AATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGC 647301 Query 48554 AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATT 48610 ||||| || ||||| || | ||| ||| || ||||| | | | | | || || Sbjct 647300 TGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTT 647241 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 |||||||| |||| ||||||| ||| | |||||| || ||||| || || || || || Sbjct 647240 CCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGC 647181 Query 48671 TTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTT 48728 || || ||||| | ||| || ||| ||||| |||||||| | ||||||||| ||| Sbjct 647180 CTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAAAACAAATCTTTTT 647123 >seq1 Length=3681944 Score = 141 bits (156), Expect = 1e-28 Identities = 401/600 (67%), Gaps = 26/600 (4%) Strand=Plus/Plus Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 ||| || | |||||||||||| || | | ||||| ||| |||| ||| | ||| || || Sbjct 1060491 CATGAATAAATCAGGTATCCAAAGTGAATAAAATAAATCACGGGCTCTCTTTTCCTCTTT 1060550 Query 78071 TCC-TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 78129 ||| || || | ||||| || | ||| || | ||||||||| ||||| ||||||| | Sbjct 1060551 TCCGTGATTTTTCCTTAAG-TCTAAAAATTCAAAAATATCAGAGTGCCAAGGTTCTAAGT 1060609 Query 78130 ATATTGCCATAA--CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTT 78187 |||| || || | || |||| |||||| || || || || | |||| |||| ||| | Sbjct 1060610 ATAT--ACAGAACGCACCCGGTCTTTTATTTCCACCTTGGTCAACATATTTGGCAGTGCT 1060667 Query 78188 ATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 ||| | ||| |||||||||| | ||| | || || || ||||| || || ||||| Sbjct 1060668 GTTAAACACTTGTAACATTGGAACTAACCCGCTCGAGGTACCGTTTGTACCTGAGATATA 1060727 Query 78248 ACTTCCACTTGCGCGAATATT--ACTAATGGATATCCCTATTCCTCCTGCCATCTTAGAT 78305 ||| || | | || || | ||| ||| || ||||| |||||| || || Sbjct 1060728 ACTGCCTGAAGATCTGATGTTTGAAACATGCATA--CCAATTCCACCTGCCGCTTTCGAG 1060785 Query 78306 ATTAGAGCGCAACGTTTCAA-TGTATCGTAGATACCCTCTAT---ACTGTCATCCATCAT 78361 |||| ||| || | | || || | | | || | ||||| | | | ||||| | Sbjct 1060786 ATTAAAGC-TGACTTGTGAACAGTTTTGAATATTTCATCTATGGAATCGCCTTCCAT--T 1060842 Query 78362 GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGG 78421 | || ||| || || |||| | | | | || || ||| ||||| || || Sbjct 1060843 GCTAGTAAG-AAGCATGATGACAAATAAGGGGTCTCTGTGCCGCTATTGAATAAAGTGGG 1060901 Query 78422 AGATGCATGCGTAAACCATTTTTCA--GAAAGTAGATTGTATGTTTC--AATAGCTGATT 78477 ||||||||| |||| || ||||| || | || | || || || || | || || Sbjct 1060902 AGATGCATGAATAAA--ATATTTCATGGACATTAATTCATAAGTCTCCAAACACCT--TT 1060957 Query 78478 CTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537 | || || | ||||||||| | || || | ||| ||||||| |||||| ||||| Sbjct 1060958 CAATATCACCACCATGAATTCCAATAGCAACTCTCATAAACATATACTGAGGCGTTTCAC 1061017 Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597 | | || |||||||||||||| ||||| ||| ||||||| |||||||||| Sbjct 1061018 AAGGAGTGCCGTTAATTTTCAACAAGTACGATTTCATCAACGTTTTAACCCCAAAATAGT 1061077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668522132480