Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 152 1e-31 seq1 149 1e-30 >seq2 Length=3419278 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| || ||| ||||||||||||||||| | | || | ||||| ||| Sbjct 1617110 ACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCT 1617169 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || |||||||| || | ||||| ||| || ||||| ||||| |||||| Sbjct 1617170 AATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGGATACCTTCCTTATCTTGG 1617229 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||||| || ||| | || |||||||| || | |||||| || | |||||| |||||| Sbjct 1617230 ATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACCTCTAAAGTGATGGTCTTA 1617289 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || || |||||||| || ||||| || Sbjct 1617290 CCAGTTAAGGTTTTAACGAAAATTTGCATCTT 1617321 >seq1 Length=3681944 Score = 149 bits (164), Expect = 1e-30 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 || || ||| ||| ||||| ||||||||||||| | || | ||||| || | ||| Sbjct 1219136 TGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCTTCCAATTGC 1219195 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || |||||||| || | |||||| ||| |||||||| ||||||||||||||||| Sbjct 1219196 TTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 1219255 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 | || || | || || ||||| || | |||||| || | |||||| |||||||| || Sbjct 1219256 GACTTGACATTGTCAATGGTGTCTGAGGATTCGACCTCTAAAGTGATGGTCTTACCAGTT 1219315 Query 283077 AAAGTCTTAACGAATATCTGCATTT 283101 || || |||||||| || ||||||| Sbjct 1219316 AAGGTTTTAACGAAAATTTGCATTT 1219340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738770836928