Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq5 246 3e-60 >seq5 Length=1013952 Score = 246 bits (272), Expect = 3e-60 Identities = 576/862 (67%), Gaps = 9/862 (1%) Strand=Plus/Minus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 |||| || || || |||||||| |||| || |||||||||||||| || ||||| || Sbjct 647985 TTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAATGGGTTGT 647926 Query 23300 AAGTATTATA-TACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCA 23358 | || || | | ||| || ||| ||| | ||||| || ||||| ||| Sbjct 647925 TAACCTTGTAGTGCTTCTTG-CAACCTAAAGATAATAATAATCTATCAGCAACAAACTCA 647867 Query 23359 ATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATAT 23418 | ||||| |||||||| || ||| ||||| | || | ||| | ||||| Sbjct 647866 ACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGCACATGGTAAGGCATCCGTG 647807 Query 23419 AAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTA 23478 ||| || ||||||||| ||| || || |||| || | |||| || ||||||| | Sbjct 647806 AAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTCTTCATTT 647747 Query 23479 GGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCC 23538 || | | || | | || |||||||| ||||||||| |||| |||||||| Sbjct 647746 GGAGTGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCT 647687 Query 23539 CTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAA 23598 |||| ||||||||||||||| || ||||| || ||||||| |||| ||||| | |||| Sbjct 647686 CTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAA 647627 Query 23599 AATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGA 23658 || || | ||||||||| || || ||||| ||||| || ||||| |||||||| || | Sbjct 647626 AAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAAT 647567 Query 23659 CGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAAT 23718 | | | ||| |||| | | |||||| | | | ||| | |||||| Sbjct 647566 CTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGTCAGCCTTTTCC 647507 Query 23719 TTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT--ATCTG 23776 || | || ||| || ||||| || || || | | ||| | || | || ||| Sbjct 647506 TTGATGCAAGGAATAGTCTCAATAGCATTGAATA-AGAAG-TCAGCCTCCTTTGGATCCT 647449 Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 | | ||| || || || | ||| || ||||||| || || ||||| || |||| Sbjct 647448 TAACATAGGTGTCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCT 647389 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 | || || || ||||| | ||||| | | ||| || || | |||| ||| | | | Sbjct 647388 GGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCA 647329 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 | || |||||||||||||| || || ||||||||||| | ||| | || ||| Sbjct 647328 AGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAA 647269 Query 23957 GTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTT 24013 |||||| ||| || || || ||||| |||| | |||| ||||||||||||| || Sbjct 647268 ATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTT 647209 Query 24014 CATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTT 24073 | || | ||||| ||| || || ||| |||||| |||| || |||| | || Sbjct 647208 CTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATT 647149 Query 24074 GTATTGGAAATATTACGAATCT 24095 ||||| || | || ||||| Sbjct 647148 TAATTGGGAACAAAACAAATCT 647127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487791404800