Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq5 246 3e-60
>seq5
Length=1013952
Score = 246 bits (272), Expect = 3e-60
Identities = 576/862 (67%), Gaps = 9/862 (1%)
Strand=Plus/Minus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299
|||| || || || |||||||| |||| || |||||||||||||| || ||||| ||
Sbjct 647985 TTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAATGGGTTGT 647926
Query 23300 AAGTATTATA-TACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCA 23358
| || || | | ||| || ||| ||| | ||||| || ||||| |||
Sbjct 647925 TAACCTTGTAGTGCTTCTTG-CAACCTAAAGATAATAATAATCTATCAGCAACAAACTCA 647867
Query 23359 ATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATAT 23418
| ||||| |||||||| || ||| ||||| | || | ||| | |||||
Sbjct 647866 ACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGCACATGGTAAGGCATCCGTG 647807
Query 23419 AAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTA 23478
||| || ||||||||| ||| || || |||| || | |||| || ||||||| |
Sbjct 647806 AAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTCTTCATTT 647747
Query 23479 GGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCC 23538
|| | | || | | || |||||||| ||||||||| |||| ||||||||
Sbjct 647746 GGAGTGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCT 647687
Query 23539 CTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAA 23598
|||| ||||||||||||||| || ||||| || ||||||| |||| ||||| | ||||
Sbjct 647686 CTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAA 647627
Query 23599 AATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGA 23658
|| || | ||||||||| || || ||||| ||||| || ||||| |||||||| || |
Sbjct 647626 AAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAAT 647567
Query 23659 CGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAAT 23718
| | | ||| |||| | | |||||| | | | ||| | ||||||
Sbjct 647566 CTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGTCAGCCTTTTCC 647507
Query 23719 TTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT--ATCTG 23776
|| | || ||| || ||||| || || || | | ||| | || | || |||
Sbjct 647506 TTGATGCAAGGAATAGTCTCAATAGCATTGAATA-AGAAG-TCAGCCTCCTTTGGATCCT 647449
Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836
| | ||| || || || | ||| || ||||||| || || ||||| || ||||
Sbjct 647448 TAACATAGGTGTCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCT 647389
Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896
| || || || ||||| | ||||| | | ||| || || | |||| ||| | | |
Sbjct 647388 GGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCA 647329
Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956
| || |||||||||||||| || || ||||||||||| | ||| | || |||
Sbjct 647328 AGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAA 647269
Query 23957 GTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTT 24013
|||||| ||| || || || ||||| |||| | |||| ||||||||||||| ||
Sbjct 647268 ATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTT 647209
Query 24014 CATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTT 24073
| || | ||||| ||| || || ||| |||||| |||| || |||| | ||
Sbjct 647208 CTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATT 647149
Query 24074 GTATTGGAAATATTACGAATCT 24095
||||| || | || |||||
Sbjct 647148 TAATTGGGAACAAAACAAATCT 647127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487791404800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |