Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1 132 6e-26 seq8 93.3 6e-14 >seq1 Length=3681944 Score = 132 bits (146), Expect = 6e-26 Identities = 303/460 (66%), Gaps = 37/460 (8%) Strand=Plus/Minus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| || | || || || || ||||| ||||||||||||||||| || ||| | Sbjct 404505 AAGGTGACCTTGGCCCAGTGTATGGTTTCCAATGGAGACATTTTGGTGCAGACTACGTTG 404446 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 | ||||| | |||| |||| |||| | |||||||| || | ||||| | | Sbjct 404445 ACTGCGATACAGATTATACAGGTAAAGGTTTCGATCAACTCGCTCAAGTGATAACCTCCT 404386 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | || |||||||| |||| | | || | |||| ||||||||||| | | | | Sbjct 404385 TAAAGACAAACCCATACGACAGAAGAATCATCATGAGTGCCTGGAATCCGCCGGCTTTCA 404326 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTA----------------- 50695 | |||| | |||||||| ||||| ||||| ||||||||||| Sbjct 404325 AACAAATGGCATTACCTCCCTGTCACGTTTTCTGTCAATTTTACGTCAACTTCCCGAAAG 404266 Query 50696 ----------TGCCACAGACAATGTTT------TATCCTGTCA--ATGTTATCAAAGATC 50737 || ||||| ||| |||| || || |||| |||||||||| Sbjct 404265 ATAACGAAGATGGCACAGCTAATAAACCAAAACTATCGTG-CATCATGT-ATCAAAGATC 404208 Query 50738 AGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTT 50797 ||||||||| |||||||||||||||||| | || || ||||| || | || | Sbjct 404207 GTGTGATATGGGATTAGGCGTTCCTTTCAACATCGCCTCATACGCACTACTCACCATCAT 404148 Query 50798 GATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCA 50857 ||| || || | ||| |||||| |||| | ||| || |||||||| | || || |||| Sbjct 404147 GATTGCCCATGTCGTTGATATGGAACCTGCAGAGTTCATTCATACTATGGGTGATTCTCA 404088 Query 50858 TATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAATTG 50897 |||| |||||| |||||||| | || |||||| || Sbjct 404087 CGTTTATTGCGATCATGTCGATGCCCTGAAAGAGCAAATG 404048 Score = 96.9 bits (106), Expect = 5e-15 Identities = 197/290 (68%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 156156 GCCTCTTGAAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAAT 156215 || || | |||||| ||||| || |||||||| ||| || |||||| || | | Sbjct 2341005 GCATCCTTAAACAAATTTCTGATATTTTCTTCCGATGAACCAACGTATTTGGATAGAATT 2341064 Query 156216 TCAGGACCGTTAACTATTTTGACGGGTCGTGA---TTTAAAAGCTTGAGCGATACAGCGA 156272 |||||||| || || ||||| || || | || || | ||| | | || | | Sbjct 2341065 TCAGGACCATTGACAATTTTA--GGTTCCTTTGCGTTCAACATCTT-ACCAATTTGTCTA 2341121 Query 156273 GCCATTAATGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTA 156332 || || || |||||||| || || || |||||||| | | ||||| | ||| | | Sbjct 2341122 GCAATCAAAGTTTTACCAGTACCTGGTGGACCGTATAATAGCATACCTTTGACATGCTGA 2341181 Query 156333 CAACCTAATTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAA 156392 |||||||| ||| ||| || |||| | ||| || ||||| ||||||| ||| Sbjct 2341182 ATGCCTAATTTCTCAATTAACCCTGGTGGAAATATTCTAGATGCAAAGGCTCTTCTGAAA 2341241 Query 156393 ATGAGAGAAAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATT 156442 ||| || |||||||||||| || || || | ||||| || ||||| || Sbjct 2341242 ATGGAAGTAAATTCTTTATCTAACCCACCAATTCCCATATCTTCAAATTT 2341291 >seq8 Length=614380 Score = 93.3 bits (102), Expect = 6e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 63716 TCGTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTT 63775 |||||||| | | | | ||| || | || | || |||| ||||||||||| ||||| | Sbjct 241568 TCGTTAAAGTTAGAATGAGAACTACAAAGACTCCGCAAATTGGTGATAAATTCGCTTC-T 241626 Query 63776 TTACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACC 63834 ||| | |||||| ||||| |||||| | ||| |||| || |||||||| ||||| Sbjct 241627 AGACATGGTCAAAAGGGTACTATTGGTATAACATATAGACACGAGGATATGCCGTTTACT 241686 Query 63835 AAAGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894 | ||||| || || ||| | ||||||| ||||| ||| |||| |||||||| Sbjct 241687 GCTCAAGGTATTGTTCCAGATTTAATCATCAACCCACATGCTATTCCATCCCGTATGACT 241746 Query 63895 GTT 63897 ||| Sbjct 241747 GTT 241749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667074933169920