Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq61 100 6e-16
seq30 93.3 9e-14
>seq61
Length=567400
Score = 100 bits (110), Expect = 6e-16
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 319806 GGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCC 319865
||| ||||| | ||||| || || || ||||| | | | || || ||||| ||
Sbjct 484389 GGAACCGTCAATGTCGTGCTCAACATAGACAGTTCTACATTCTTCTTGAGTTGGGAAACC 484330
Query 319866 TTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCC 319925
||| | || ||||| ||||||| | |||||| || || ||||| || |||||||| ||
Sbjct 484329 TTCGACTTGACCGTTGGCAATAGCCCTCATCAGAGTAGACTTACCAGCACCGTTTGGACC 484270
Query 319926 ACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTT 319985
|| |||||||| | | | | |||| | | | || ||||||| | || ||
Sbjct 484269 GCAAAGACCGTATCTTCTAGCTCTCTTCAATCTAAGTTGAGTCTTGTTCAATAAGATCTT 484210
Query 319986 TCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
||||||| |||||||| || ||||| | ||| |||||||||||
Sbjct 484209 GGCACCATAAGCCAGAGAGAACTCACAGTTACAGAGATCCTCACC 484165
>seq30
Length=286775
Score = 93.3 bits (102), Expect = 9e-14
Identities = 184/269 (68%), Gaps = 5/269 (2%)
Strand=Plus/Minus
Query 319402 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 319461
|| || |||||||||| || |||||||| | | ||| || ||| ||| || ||
Sbjct 188480 TTGACAAACTCGGACAAGTTGCCCTTGTAGTACACCAGTTTCTTGTT---TTCATAGTGT 188424
Query 319462 ATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAA 319521
|| | ||||| |||| ||| | || || || ||||| || ||||||| |||
Sbjct 188423 ATGACGTCAGTGCAGACAGTGTCCAAAAATCCAGAATCGTGCGAAACAATCAGAGACGTG 188364
Query 319522 ACGTCCTTAAGGTTGATCAGGTATTCAATCAA-CCACCTCACGTTAGACACAGAAAGATG 319580
| || | | | | ||||| || |||| ||| |||| || || ||| |||||
Sbjct 188363 ATATCTGTGTGCTGAACTAGGTAATCT-TCAAGCCATTTCACATTGGAAACATCCAGATG 188305
Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640
|||||| |||||||| |||||||| | | || |||| ||||| || | ||||| |
Sbjct 188304 GTTGGTTGGCTCGTCGAGAAGCAGAACGTCAGCCTTCATAAGCATGGCTCTCGCAAGTTC 188245
Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAGAG 319669
|| ||||| ||||| ||||| || ||||
Sbjct 188244 AAGCTTCATCTTCCATCCTCCTGAGAGAG 188216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823105477580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |