Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq45 161 1e-34 >seq45 Length=88998 Score = 161 bits (178), Expect = 1e-34 Identities = 391/585 (67%), Gaps = 9/585 (2%) Strand=Plus/Plus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 |||||| || || ||| ||| | ||||||||||||| ||| | ||||| || || || Sbjct 65116 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 65175 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 || || |||||| ||||| ||||| | ||| || |||| ||| ||||| ||||| || Sbjct 65176 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 65235 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| |||||||| |||| |||||||| | | || ||||| || || || | || Sbjct 65236 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTC 65295 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 |||||| || |||| ||||| || | ||| || || || || || ||||| Sbjct 65296 GTTGATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGC 65355 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 || || | ||| ||||| |||| | | || || ||||| || || ||| Sbjct 65356 GTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGTA 65415 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 | |||| ||||| ||||||||||| ||||| || ||||| || || ||| || | Sbjct 65416 CGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAGG 65475 Query 17320 TATTTGAACTTCCACGTAGAATCGTTC-CG-CTAGATTTTCGTTCACGATGCCGTCGCTC 17377 | ||| || || | |||| |||| || | | || ||||| || |||||||| Sbjct 65476 AACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAA 65533 Query 17378 GCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT--CCG--GTGTAAGAAC 17433 || || || || ||||| | | || || ||| | |||| || | || | Sbjct 65534 GCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTG-TT 65592 Query 17434 GCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCAC 17493 | |||||| | | || ||||| | ||| | ||| || | |||||| || ||| | Sbjct 65593 GTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTC 65652 Query 17494 TGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 |||||| || ||||| | |||||| || | ||| | || ||||| Sbjct 65653 TGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAA 65697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545173024880