Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq65 196 6e-45 seq45 181 1e-40 seq52 104 3e-17 >seq65 Length=94251 Score = 196 bits (216), Expect = 6e-45 Identities = 443/663 (67%), Gaps = 6/663 (1%) Strand=Plus/Minus Query 54004 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 54063 || || |||||| ||| | || |||| | ||| || || || |||||||| || || Sbjct 84077 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 84018 Query 54064 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 54123 || || ||||||| ||| ||||| || || ||||| | |||| || Sbjct 84017 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 83958 Query 54124 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTT 54183 | | |||||| || ||||| || || | ||| | | | | |||||||| ||||| Sbjct 83957 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 83898 Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243 |||||||| || | |||||| |||||||| || | ||||||| ||||||||| || || Sbjct 83897 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 83838 Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 54303 ||||| | || ||||| || | ||| || || ||| | ||| || ||| Sbjct 83837 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 83778 Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363 ||||| || || || || || ||||| | || || || | || |||||||| Sbjct 83777 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 83718 Query 54364 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 54423 ||| || || || ||| ||||| || | |||||| |||||| || || || Sbjct 83717 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 83658 Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483 ||| || |||||||| | || || || ||||| || || |||||| || | || || Sbjct 83657 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 83598 Query 54484 GTACGTCTCGAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 54540 |||||||||||| |||| | | | ||| | ||| || || | || |||||||| Sbjct 83597 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 83541 Query 54541 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTC 54600 | ||||||||| ||||| || ||| || | || |||| | || || || Sbjct 83540 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 83481 Query 54601 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660 || || || || |||||||||||||| |||||||||| ||||| | || | ||||| Sbjct 83480 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 83421 Query 54661 GAG 54663 || Sbjct 83420 CAG 83418 >seq45 Length=88998 Score = 181 bits (200), Expect = 1e-40 Identities = 413/611 (68%), Gaps = 18/611 (3%) Strand=Plus/Plus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 || ||| || || ||| || |||||||||||||| | || || ||||| || || || Sbjct 65116 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 65175 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 || || ||||| || || | ||| || ||||| || || || ||||| || ||||| || Sbjct 65176 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 65235 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCT-----G 24305 |||||| || || || || ||||| |||| ||||| || || ||| || ||| | Sbjct 65236 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 65293 Query 24306 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 24364 || | ||||| || || ||||| |||||||||| || | ||| || || ||||| || Sbjct 65294 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 65352 Query 24365 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 24424 || || || || | | ||| ||| || || || || || || |||| ||| Sbjct 65353 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 65412 Query 24425 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 24484 ||| ||||||| || ||||| || || || || || ||||||||||| | ||||| Sbjct 65413 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 65472 Query 24485 GGTAATCTGTACTTCTATACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCA 24542 | || || || || | | || ||||| | || || || || || || ||||| Sbjct 65473 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 65530 Query 24543 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 24599 || ||||| || ||||| || | ||| ||| | |||| || ||| ||| Sbjct 65531 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 65589 Query 24600 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 24658 || ||||| || | | || || || | ||| | ||| || | ||||| || || || Sbjct 65590 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 65649 Query 24659 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 ||||||||| || ||||| | ||| || || || || | || || || | ||||| || Sbjct 65650 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 65709 Query 24719 ATTTGGATTTT 24729 || ||||| Sbjct 65710 TCTTTTATTTT 65720 >seq52 Length=883241 Score = 104 bits (114), Expect = 3e-17 Identities = 597/933 (64%), Gaps = 38/933 (4%) Strand=Plus/Minus Query 53704 TGCAATAGATGCCAGATTACAAACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 53760 ||| | ||| | ||||| || || ||| ||||||||| || | ||||| | || Sbjct 650505 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 650449 Query 53761 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 53820 ||| || ||||| |||||||||| || |||||||| || ||| |||||| || Sbjct 650448 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 650389 Query 53821 ACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGC 53880 || || || || || || | ||| || || || ||||| |||| || ||| ||||| Sbjct 650388 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 650329 Query 53881 TTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAGT 53938 | ||| | | || || | | || | || | || | ||| || | | Sbjct 650328 ATGCCACAGTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGTT 650269 Query 53939 GTATACAATCGTT-CAAACTCGTCTCCCCAAACATTGTCC---AATCCAGGACATTCATC 53994 ||| || | | |||| || ||||| || |||| | ||||||| ||| ||| Sbjct 650268 GTA---AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATC 650215 Query 53995 C--GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGA 54052 | ||| | | | |||||||| || | || ||| | |||||| | ||| || Sbjct 650214 CTCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGT 650157 Query 54053 ATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTT 54111 ||||||||||| ||||| |||||| | | | ||| || ||||| || || | | Sbjct 650156 ATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTC 650097 Query 54112 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCC 54171 ||| || |||||| | | | || | ||||||||| || || || ||| | | | || Sbjct 650096 AAG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCC 650038 Query 54172 AGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 54231 || | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | ||| Sbjct 650037 TGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCAT 649978 Query 54232 TGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 54291 || | || || ||||||| |||||| || || || || || || || || || Sbjct 649977 AGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGAT 649918 Query 54292 ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 54351 || || || || || || || ||| |||||| || | ||| | | | | || Sbjct 649917 GTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGAA 649859 Query 54352 -CGTATCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGTAGAAAACAG--CTAG 54407 ||| | ||||| | |||| || |||| ||| ||| ||||||||| | Sbjct 649858 TCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGAT 649800 Query 54408 ACATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 54466 | ||| || || | || || || || || | ||||| ||||| || | || || Sbjct 649799 AAATTAGG---CGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTAT 649743 Query 54467 TTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCT 54526 ||||| || | || |||| || |||| | | |||||||| | || || || || Sbjct 649742 TTTTCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCA 649683 Query 54527 ACTGCGACACGCATTAACATGTGCTGAG--GTCTTTCAACGATCTTGTTGTTTATTTTCA 54584 | || || | ||| |||| | ||||| |||| ||| | |||| | ||||| | Sbjct 649682 ATGGCCACTCTCATAAACAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTTA 649625 Query 54585 GCAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 54617 |||| || ||| |||||| ||| | ||||||| Sbjct 649624 GCAAATATGATCTTTCCATTGTTCTGAAACCAA 649592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721110179680