Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq65 196 6e-45
seq45 181 1e-40
seq52 104 3e-17
>seq65
Length=94251
Score = 196 bits (216), Expect = 6e-45
Identities = 443/663 (67%), Gaps = 6/663 (1%)
Strand=Plus/Minus
Query 54004 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 54063
|| || |||||| ||| | || |||| | ||| || || || |||||||| || ||
Sbjct 84077 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 84018
Query 54064 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 54123
|| || ||||||| ||| ||||| || || ||||| | |||| ||
Sbjct 84017 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 83958
Query 54124 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTT 54183
| | |||||| || ||||| || || | ||| | | | | |||||||| |||||
Sbjct 83957 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 83898
Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243
|||||||| || | |||||| |||||||| || | ||||||| ||||||||| || ||
Sbjct 83897 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 83838
Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 54303
||||| | || ||||| || | ||| || || ||| | ||| || |||
Sbjct 83837 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 83778
Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363
||||| || || || || || ||||| | || || || | || ||||||||
Sbjct 83777 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 83718
Query 54364 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 54423
||| || || || ||| ||||| || | |||||| |||||| || || ||
Sbjct 83717 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 83658
Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
||| || |||||||| | || || || ||||| || || |||||| || | || ||
Sbjct 83657 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 83598
Query 54484 GTACGTCTCGAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 54540
|||||||||||| |||| | | | ||| | ||| || || | || ||||||||
Sbjct 83597 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 83541
Query 54541 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTC 54600
| ||||||||| ||||| || ||| || | || |||| | || || ||
Sbjct 83540 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 83481
Query 54601 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|| || || || |||||||||||||| |||||||||| ||||| | || | |||||
Sbjct 83480 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 83421
Query 54661 GAG 54663
||
Sbjct 83420 CAG 83418
>seq45
Length=88998
Score = 181 bits (200), Expect = 1e-40
Identities = 413/611 (68%), Gaps = 18/611 (3%)
Strand=Plus/Plus
Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190
|| ||| || || ||| || |||||||||||||| | || || ||||| || || ||
Sbjct 65116 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 65175
Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250
|| || ||||| || || | ||| || ||||| || || || ||||| || ||||| ||
Sbjct 65176 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 65235
Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCT-----G 24305
|||||| || || || || ||||| |||| ||||| || || ||| || ||| |
Sbjct 65236 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 65293
Query 24306 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 24364
|| | ||||| || || ||||| |||||||||| || | ||| || || ||||| ||
Sbjct 65294 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 65352
Query 24365 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 24424
|| || || || | | ||| ||| || || || || || || |||| |||
Sbjct 65353 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 65412
Query 24425 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 24484
||| ||||||| || ||||| || || || || || ||||||||||| | |||||
Sbjct 65413 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 65472
Query 24485 GGTAATCTGTACTTCTATACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCA 24542
| || || || || | | || ||||| | || || || || || || |||||
Sbjct 65473 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 65530
Query 24543 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 24599
|| ||||| || ||||| || | ||| ||| | |||| || ||| |||
Sbjct 65531 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 65589
Query 24600 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 24658
|| ||||| || | | || || || | ||| | ||| || | ||||| || || ||
Sbjct 65590 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 65649
Query 24659 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718
||||||||| || ||||| | ||| || || || || | || || || | ||||| ||
Sbjct 65650 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 65709
Query 24719 ATTTGGATTTT 24729
|| |||||
Sbjct 65710 TCTTTTATTTT 65720
>seq52
Length=883241
Score = 104 bits (114), Expect = 3e-17
Identities = 597/933 (64%), Gaps = 38/933 (4%)
Strand=Plus/Minus
Query 53704 TGCAATAGATGCCAGATTACAAACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 53760
||| | ||| | ||||| || || ||| ||||||||| || | ||||| | ||
Sbjct 650505 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 650449
Query 53761 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 53820
||| || ||||| |||||||||| || |||||||| || ||| |||||| ||
Sbjct 650448 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 650389
Query 53821 ACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGC 53880
|| || || || || || | ||| || || || ||||| |||| || ||| |||||
Sbjct 650388 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 650329
Query 53881 TTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAGT 53938
| ||| | | || || | | || | || | || | ||| || | |
Sbjct 650328 ATGCCACAGTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGTT 650269
Query 53939 GTATACAATCGTT-CAAACTCGTCTCCCCAAACATTGTCC---AATCCAGGACATTCATC 53994
||| || | | |||| || ||||| || |||| | ||||||| ||| |||
Sbjct 650268 GTA---AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATC 650215
Query 53995 C--GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGA 54052
| ||| | | | |||||||| || | || ||| | |||||| | ||| ||
Sbjct 650214 CTCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGT 650157
Query 54053 ATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTT 54111
||||||||||| ||||| |||||| | | | ||| || ||||| || || | |
Sbjct 650156 ATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTC 650097
Query 54112 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCC 54171
||| || |||||| | | | || | ||||||||| || || || ||| | | | ||
Sbjct 650096 AAG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCC 650038
Query 54172 AGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 54231
|| | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | |||
Sbjct 650037 TGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCAT 649978
Query 54232 TGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 54291
|| | || || ||||||| |||||| || || || || || || || || ||
Sbjct 649977 AGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGAT 649918
Query 54292 ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 54351
|| || || || || || || ||| |||||| || | ||| | | | | ||
Sbjct 649917 GTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGAA 649859
Query 54352 -CGTATCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGTAGAAAACAG--CTAG 54407
||| | ||||| | |||| || |||| ||| ||| ||||||||| |
Sbjct 649858 TCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGAT 649800
Query 54408 ACATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 54466
| ||| || || | || || || || || | ||||| ||||| || | || ||
Sbjct 649799 AAATTAGG---CGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTAT 649743
Query 54467 TTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCT 54526
||||| || | || |||| || |||| | | |||||||| | || || || ||
Sbjct 649742 TTTTCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCA 649683
Query 54527 ACTGCGACACGCATTAACATGTGCTGAG--GTCTTTCAACGATCTTGTTGTTTATTTTCA 54584
| || || | ||| |||| | ||||| |||| ||| | |||| | ||||| |
Sbjct 649682 ATGGCCACTCTCATAAACAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTTA 649625
Query 54585 GCAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 54617
|||| || ||| |||||| ||| | |||||||
Sbjct 649624 GCAAATATGATCTTTCCATTGTTCTGAAACCAA 649592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721110179680
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