Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq45 361 6e-95
seq23 116 4e-21
seq64 107 2e-18
>seq45
Length=88998
Score = 361 bits (400), Expect = 6e-95
Identities = 592/845 (70%), Gaps = 20/845 (2%)
Strand=Plus/Minus
Query 116604 GGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGG 116663
|||| || | ||||| || | |||| || || |||| |||||||| ||||| ||||
Sbjct 65708 GGTTTGTCTTGTTCCCTATCAAGTACCACGAGATTTGGCAGATGTACAAGAAGGCAGAGG 65649
Query 116664 CGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCT 116723
| ||||||||||||| ||||| | || |||||||||||| | ||||||| | |
Sbjct 65648 CCTCGTTCTGGACCGCAGAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACAACA 65589
Query 116724 ---TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCG 116780
| |||||||||||| | | || | | ||| ||||||| || || || |
Sbjct 65588 GACTCAACGACAACGAGAGATACTTTGTTTCGAGAGTGTTGGCCTTCTTTGCTGCTTCGG 65529
Query 116781 ACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGG 116840
||||||| ||||||||||| |||||||| ||| || |||||||| || | ||||
Sbjct 65528 ACGGCATTGTCAACGAGAACTTGGTCGAGAACTTCTCTGCCGAGGTGCAAGTTCCTGAGG 65469
Query 116841 CGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGA 116900
| ||| |||||||| || |||||| ||||||||| | |||||||||| ||| |||
Sbjct 65468 CCAAGTGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGC 65409
Query 116901 CCCTCATCGACACGTACGT---GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCA 116957
|| |||||||| ||||| | | || ||| | || ||| ||| |||||||
Sbjct 65408 TTCTGATCGACACCTACGTCAAGGACCCTAAGGAAGCTGAGTTCCTTTTC---AACGCCA 65352
Query 116958 TCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCA 117017
| ||||| || || || |||| ||||||||||| ||||| || | |||||| || |
Sbjct 65351 TTGAGACCATCCCATGTATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCAACGACG 65292
Query 117018 GAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTT 117077
|| ||| || | |||| | || || || || || ||||| ||||| | ||||| |
Sbjct 65291 AGGAAGCCCTGTTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCT 65232
Query 117078 CGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTT 117137
| ||| || ||| | || || ||||||||||| | || || ||||| || ||||| |
Sbjct 65231 CTGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCTGACCT 65172
Query 117138 TCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197
|| |||||| | |||| ||| ||||||||||||||| ||||||||||||| |||| |
Sbjct 65171 TCTCGAACGAGTTGATCTGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCTGCTCT 65112
Query 117198 TCAAGCATTTGGTGCAGCGACC----GAGCG-CGGCGCGCGTCAGGGAGATCGTCACCGA 117252
|| ||| | || | || |||| | || || ||| ||||| |||||||
Sbjct 65111 TCTCGCACCT-CAACAACACCCCAAACAGCGACATCGTGC-TCA---AGATCATCACCGA 65057
Query 117253 CGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACT 117312
|| |||| ||||| || | | | ||||||| || ||||| || |||||||| |
Sbjct 65056 GGCCGTCGAGATCGAAAAGAGATACTTCACCGACGCCCTGCCTGTCAACCTGCTGGGTAT 64997
Query 117313 CAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCT 117372
|| ||| | ||||| || ||| | ||||| || || ||| ||||||| | ||
Sbjct 64996 GAACTGCAACCTGATGTGCCAGTACGTGGAGTTTGTTGCTGACCGGCTGCTTTTATCTCT 64937
Query 117373 GGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC-CT 117431
|| | || |||||||||||| | | |||||| | ||||| ||| | |||||| ||
Sbjct 64936 GGGCTGCAAGAAGCACTACAACGCCACAAACCCGTTCGACTTCATGGAGAACATCTCTCT 64877
Query 117432 TGGAG 117436
|| ||
Sbjct 64876 TGCAG 64872
>seq23
Length=343512
Score = 116 bits (128), Expect = 4e-21
Identities = 154/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || || || || || || |||||| |||| || || | |
Sbjct 313023 AATGCAAATCTTCGTCAAGACCCTGACCGGTAAGACTATCACCCTCGAGGTGGAGTCTTC 313082
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
||||| | | | |||| ||||| || || | ||||| ||||| ||||| | ||||
Sbjct 313083 CGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCTGACC 313141
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
||||| |||| || | ||| || || ||||| || |||| | || || |||||||
Sbjct 313142 AGCAAAGACTGATTTTCGCTGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACA 313201
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||| |||| |||| || ||
Sbjct 313202 ACATCCAGAAGGAGTCCACTTTGCACCTGGT 313232
>seq64
Length=816055
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| || || | || || || ||||||||| | || ||||| |
Sbjct 728495 AAAATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCT 728554
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | | | |||| ||||| || || | |||||||| || ||||| | ||
Sbjct 728555 TCCGACACCATCGATAACG-TCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGA 728613
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||||||| || | |||| ||| || || || || || |||| | ||||| |||||
Sbjct 728614 CCAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTA 728673
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||| || ||| |||| ||||| | || || | |||| || ||
Sbjct 728674 CAACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGG 728724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218774944160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |