Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq61 129 9e-25
seq64 84.2 3e-11
>seq61
Length=567400
Score = 129 bits (142), Expect = 9e-25
Identities = 172/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || || | ||||| | || ||||||||||| ||| ||||| | ||| |
Sbjct 445606 AATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTC 445547
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||| || || |||| | ||| ||| ||||||||||| ||||| || || ||||| ||
Sbjct 445546 TGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCA 445487
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||||| || |||||||| || || || |||| || || |||| | ||||| ||
Sbjct 445486 GCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAA 445427
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| ||||| || || ||||| ||||| | | || |||||||||| ||| ||
Sbjct 445426 CATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGAGGTGGTATGCAAATTT 445368
Score = 120 bits (132), Expect = 5e-22
Identities = 184/260 (71%), Gaps = 3/260 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | || || || || || || | ||| |||| | |
Sbjct 444921 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 444862
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || |||| | || |||||||||||||| ||||| || || ||||| ||
Sbjct 444861 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 444802
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| |||||||| || || || ||| | || || || |||| ||| || |||||
Sbjct 444801 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 444742
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777
|||||||| || || || |||||| ||||||| | || |||||||||| ||| |||
Sbjct 444741 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGGTATGCAAATTTTC 444682
Query 124778 ATAAAAA--TTGATTGTAAA 124795
| |||| |||| || |||
Sbjct 444681 GTTAAAACCTTGACTGGAAA 444662
Score = 105 bits (116), Expect = 1e-17
Identities = 166/238 (70%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | || || || || || || | ||| |||| | |
Sbjct 445377 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445318
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || |||| | || |||||||||||||| ||||| || || ||||| ||
Sbjct 445317 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445258
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| || |||||||| || || || |||| || || |||| | ||||| ||
Sbjct 445257 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445198
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|||||||| || || || ||||| ||||||| | || |||||||||| ||| ||
Sbjct 445197 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGGTATGCAAATTT 445140
Score = 93.3 bits (102), Expect = 6e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|||||||| ||||| ||||| || || ||||| || ||||| || |||||||| || ||
Sbjct 444609 AAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTCATTTTTGCTGGTAAG 444550
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|| |||| || || |||| | ||||| || ||||| || ||||| ||| | |||
Sbjct 444549 CAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAGGAATCTACTCTTCAT 444490
Query 124743 TTGGTTTTACGTTTACGAGGTGGT 124766
|||||||| | | ||||||||
Sbjct 444489 TTGGTTTTGAGACTGAGAGGTGGT 444466
Score = 91.5 bits (100), Expect = 2e-13
Identities = 163/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | || || || || || || | ||| |||| | |
Sbjct 445149 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445090
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || |||| | ||| |||||||| |||||||| ||||| || |||||||||
Sbjct 445089 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445030
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | ||||| || || || ||| | || || | |||| | ||||| ||
Sbjct 445029 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAAC 444970
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| ||||| || || ||||| |||| | | || |||||||||| ||| ||
Sbjct 444969 ATTCAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGAGGTGGTATGCAAATTT 444912
>seq64
Length=816055
Score = 84.2 bits (92), Expect = 3e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| || ||||| |||||||| || || ||||| || ||||| | || || || || ||
Sbjct 728582 AAGATCCAAGACAAAGAAGGAATCCCTCCTGACCAGCAAAGATTGATCTTCGCCGGTAAG 728641
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
||| | ||||| | |||| | ||| || || || |||||||| || |||||||||
Sbjct 728642 CAACTCGAGGACGGCAGAACCCTTTCAGACTACAACATCCAAAAAGAGTCCACTTTGCAT 728701
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||| | | | ||||||||||
Sbjct 728702 TTGGTTCTGAGACTGAGAGGTGGTAT 728727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455376748800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |