Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq61 125 6e-24
seq64 89.7 4e-13
seq23 84.2 2e-11
seq65 82.4 7e-11
>seq61
Length=567400
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||||| |||||||| | ||||||||||| |||||||||||||||
Sbjct 445377 TACCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGG 445436
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| | || || ||||| || ||||| | ||||| | ||||| || ||||
Sbjct 445437 ACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAG 445496
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| ||| ||| || ||| || | |||| ||||| | || |
Sbjct 445497 GGATTCCTTCCTTATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTA 445556
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | ||||||||||||| ||| || || |||||||||||
Sbjct 445557 CCTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCAT 445605
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||| ||| | || ||||| ||||||||||||||||||
Sbjct 445149 TACCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGG 445208
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| | || || ||||| || ||||| | ||||| | ||||| || ||||
Sbjct 445209 ACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAG 445268
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| ||| |||||| || || | |||| ||||| | | ||| |
Sbjct 445269 GGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAA 445328
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 445329 CCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||||| |||| ||| | ||||||||||| ||||||||||||||
Sbjct 444921 TACCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAG 444980
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| | || ||||| || || |||||| | || | | ||| ||||| || |
Sbjct 444981 ACAGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCG 445040
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||| || || |||||| ||| || | |||| ||||| | | ||| |
Sbjct 445041 GGATACCCTCTTTATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAA 445100
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 445101 CCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445149
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582
|||||| ||||| || | ||||| || || ||||||||||||||| || ||| |
Sbjct 444478 TCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTACC 444537
Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642
|| || ||||| || ||||| | ||||| | ||||| || || || || || |||||
Sbjct 444538 GTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTT 444597
Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702
|| |||||| || || | |||| ||||| | | ||| ||||| | ||| |
Sbjct 444598 ATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGAT 444657
Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || |||| ||||| || ||||| |||||
Sbjct 444658 GGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 444693
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||| || | || ||||| ||||||||||| || |||
Sbjct 444693 TACCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGG 444752
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || | || ||||| || || |||||| | || || | ||||| || || |
Sbjct 444753 ATAACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGG 444812
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| ||| |||||| || || | |||| ||||| | | ||| |
Sbjct 444813 GGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAA 444872
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 444873 CCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 444921
>seq64
Length=816055
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | | ||||| ||||| || | || ||||||||||| |||||||| ||
Sbjct 728726 TACCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTG 728667
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || | |||||||| || || || ||| |||| | | ||||| || ||||
Sbjct 728666 AAAGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAG 728607
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || |||||| || || || || | |||| |||||| | |||||
Sbjct 728606 GGATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGA 728547
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || ||||||| || || || |||||||||||
Sbjct 728546 CCTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 728498
>seq23
Length=343512
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || |||||||| || | ||| | ||||||
Sbjct 313232 ACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 313173
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| | || || | ||||| || || || || |||||||||||
Sbjct 313172 AGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGG 313113
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||| ||||||| ||| | || ||
Sbjct 313112 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTA 313053
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || || || || |||||
Sbjct 313052 CCGGTCAGGGTCTTGACGAAGATTTGCAT 313024
>seq65
Length=94251
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134421 TAAATGCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACACATTTGTTGA 134480
|| ||||| |||| | ||||||||| ||| || |||||| ||| |||| || ||
Sbjct 83722 TAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGA 83663
Query 134481 CGACGCGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGGTGCCCAGACTCATC 134540
|| | ||||| || ||||||||| || |||||| || ||| | ||||
Sbjct 83662 TGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATC 83603
Query 134541 AACTGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCAGAGCGACGCGC 134600
| | || || || |||||||| || ||| ||||| || || | | || || |||
Sbjct 83602 AGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGC 83543
Query 134601 ATGAGCATGTGTTGGGGTCTCTC 134623
|||| |||||| |||||||||||
Sbjct 83542 ATGACCATGTGCTGGGGTCTCTC 83520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830051037672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |